Variant Details

Variant: esv3632781

Internal ID

7019592

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr13:77597137..77598056	hg38	UCSC Ensembl
Inner	chr13:77597138..77598056	hg38	UCSC Ensembl
Outer	chr13:77597137..77598057	hg38	UCSC Ensembl
	chr13:78171272..78172191	hg19	UCSC Ensembl
Inner	chr13:78171273..78172191	hg19	UCSC Ensembl
Outer	chr13:78171272..78172192	hg19	UCSC Ensembl

Cytoband

13q22.3

Allele length

Assembly	Allele length
hg38	920
hg19	920

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv14801470, essv14801458, essv14801449, essv14801468, essv14801452, essv14801459, essv14801461, essv14801444, essv14801456, essv14801465, essv14801441, essv14801454, essv14801463, essv14801469, essv14801436, essv14801438, essv14801473, essv14801434, essv14801439, essv14801478, essv14801477, essv14801472, essv14801447, essv14801448, essv14801435, essv14801457, essv14801475, essv14801471, essv14801466, essv14801474, essv14801443, essv14801467, essv14801455, essv14801479, essv14801446, essv14801453, essv14801432, essv14801462, essv14801464, essv14801476, essv14801437, essv14801450, essv14801445, essv14801433, essv14801440, essv14801442, essv14801451, essv14801460

Samples

NA19394, HG01986, HG02574, NA19332, HG03057, HG02337, NA18878, HG03086, HG03135, HG02489, NA19041, HG03520, HG03189, HG03268, NA19238, HG02642, NA20127, HG02716, HG02977, HG02582, NA19327, NA19455, HG03081, HG03311, HG03085, NA18853, HG02585, NA19225, HG03109, HG02772, HG02813, HG02455, NA19309, NA18517, HG02501, NA19037, NA19380, NA19835, HG02107, NA19093, HG02676, NA18873, NA19900, HG03162, HG02947, NA19430, NA18511, HG01886

Known Genes

SCEL

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3632781

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	48
Observed Complex	0
Frequency	n/a