Variant Details

Variant: esv3628109

Internal ID

6668253

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr11:131726291..131727357	hg38	UCSC Ensembl
Inner	chr11:131726300..131727348	hg38	UCSC Ensembl
Outer	chr11:131726282..131727366	hg38	UCSC Ensembl
	chr11:131596185..131597251	hg19	UCSC Ensembl
Inner	chr11:131596194..131597242	hg19	UCSC Ensembl
Outer	chr11:131596176..131597260	hg19	UCSC Ensembl

Cytoband

11q25

Allele length

Assembly	Allele length
hg38	1067
hg19	1067

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv14316967, essv14316973, essv14316971, essv14316975, essv14317077, essv14317051, essv14316991, essv14317042, essv14317035, essv14317059, essv14317044, essv14317020, essv14317032, essv14317041, essv14317085, essv14316996, essv14317063, essv14317065, essv14317015, essv14316980, essv14317050, essv14317067, essv14317048, essv14317068, essv14317037, essv14317031, essv14317080, essv14317069, essv14317053, essv14317000, essv14317086, essv14316999, essv14316965, essv14317007, essv14316995, essv14316977, essv14316988, essv14317062, essv14317029, essv14317079, essv14317057, essv14317026, essv14317036, essv14317078, essv14317047, essv14316963, essv14317049, essv14317001, essv14317083, essv14316986, essv14317054, essv14317043, essv14316993, essv14317088, essv14317084, essv14317075, essv14317064, essv14316979, essv14316970, essv14317018, essv14316972, essv14317002, essv14317056, essv14317038, essv14316968, essv14317017, essv14317019, essv14317058, essv14317011, essv14316981, essv14316976, essv14317060, essv14317005, essv14317033, essv14317027, essv14317025, essv14316983, essv14317013, essv14317089, essv14317010, essv14316984, essv14317052, essv14317039, essv14317022, essv14317081, essv14316978, essv14317014, essv14316998, essv14317021, essv14317023, essv14316969, essv14317009, essv14316974, essv14317030, essv14316966, essv14317090, essv14317072, essv14316990, essv14317070, essv14316994, essv14316992, essv14317087, essv14317074, essv14317012, essv14316962, essv14317045, essv14317076, essv14317082, essv14317006, essv14317028, essv14317046, essv14316987, essv14316997, essv14317024, essv14317061, essv14316982, essv14316964, essv14317073, essv14317034, essv14317040, essv14317071, essv14317016, essv14317008, essv14317004, essv14316989, essv14316985, essv14317055, essv14317003, essv14317066

Samples

HG02574, HG02339, NA19028, HG02890, NA19222, HG03378, NA19909, NA19204, HG01885, HG03175, HG03247, NA18881, HG02836, HG03130, HG02323, HG03100, HG03295, NA20332, NA19377, HG03518, HG03297, HG03139, HG03464, HG01366, HG03099, HG03485, HG02549, HG03246, NA19023, NA18498, NA19904, NA19384, NA20291, HG02922, HG02111, HG01242, HG02981, HG03520, HG02461, HG03045, HG02885, NA19385, NA19172, NA19471, HG01405, HG03352, NA19901, HG03380, HG02502, NA18864, HG03055, HG03369, HG03270, HG02716, HG02442, HG03120, NA19247, HG01882, HG01879, NA19913, NA19455, NA19043, NA19236, NA18871, HG03081, HG02508, HG03027, HG03124, HG01392, HG03563, HG03472, NA19118, HG03382, HG03476, HG02817, NA19042, NA18856, NA19113, HG03446, HG02884, HG03024, NA19099, HG02256, HG01890, NA19395, HG02594, HG01988, HG01896, HG02722, HG02255, NA19308, HG02282, HG03240, NA19108, HG03461, NA18517, HG03437, HG02546, HG02721, NA19435, HG03458, NA20804, HG02611, HG02314, HG02982, HG02814, HG02558, NA19323, HG02970, HG03066, HG02646, HG02938, NA19713, NA19093, HG03060, NA20289, HG03410, NA19213, HG03470, HG03401, HG02051, NA19146, NA19312, HG02465, HG03072, HG03118, HG03129, HG02343, HG03439

Known Genes

NTM

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3628109

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	129
Observed Complex	0
Frequency	n/a