Variant Details

Variant: esv3626736

Internal ID

6666884

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr11:68299773..68301695	hg38	UCSC Ensembl
Inner	chr11:68299804..68301665	hg38	UCSC Ensembl
Outer	chr11:68299743..68301726	hg38	UCSC Ensembl
	chr11:68067241..68069163	hg19	UCSC Ensembl
Inner	chr11:68067272..68069133	hg19	UCSC Ensembl
Outer	chr11:68067211..68069194	hg19	UCSC Ensembl

Cytoband

11q13.2

Allele length

Assembly	Allele length
hg38	1923
hg19	1923

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv14200249, essv14200169, essv14200139, essv14200133, essv14200272, essv14200158, essv14200096, essv14200219, essv14200127, essv14200266, essv14200097, essv14200227, essv14200263, essv14200237, essv14200159, essv14200090, essv14200276, essv14200087, essv14200198, essv14200185, essv14200112, essv14200204, essv14200130, essv14200277, essv14200109, essv14200282, essv14200148, essv14200099, essv14200229, essv14200274, essv14200248, essv14200234, essv14200152, essv14200110, essv14200228, essv14200215, essv14200232, essv14200125, essv14200115, essv14200078, essv14200176, essv14200177, essv14200209, essv14200153, essv14200077, essv14200192, essv14200123, essv14200205, essv14200156, essv14200218, essv14200199, essv14200145, essv14200213, essv14200223, essv14200222, essv14200164, essv14200238, essv14200252, essv14200196, essv14200162, essv14200180, essv14200107, essv14200224, essv14200260, essv14200171, essv14200253, essv14200184, essv14200217, essv14200251, essv14200155, essv14200175, essv14200207, essv14200191, essv14200146, essv14200163, essv14200073, essv14200194, essv14200134, essv14200261, essv14200135, essv14200236, essv14200206, essv14200195, essv14200278, essv14200270, essv14200140, essv14200142, essv14200117, essv14200281, essv14200101, essv14200262, essv14200187, essv14200174, essv14200161, essv14200094, essv14200243, essv14200212, essv14200114, essv14200168, essv14200271, essv14200143, essv14200118, essv14200104, essv14200241, essv14200203, essv14200264, essv14200245, essv14200190, essv14200116, essv14200279, essv14200275, essv14200165, essv14200082, essv14200100, essv14200230, essv14200197, essv14200239, essv14200170, essv14200221, essv14200257, essv14200200, essv14200186, essv14200091, essv14200240, essv14200268, essv14200149, essv14200124, essv14200247, essv14200254, essv14200183, essv14200093, essv14200106, essv14200267, essv14200265, essv14200105, essv14200201, essv14200075, essv14200225, essv14200211, essv14200089, essv14200080, essv14200144, essv14200092, essv14200083, essv14200157, essv14200193, essv14200088, essv14200138, essv14200189, essv14200122, essv14200246, essv14200129, essv14200121, essv14200231, essv14200255, essv14200126, essv14200256, essv14200220, essv14200166, essv14200150, essv14200108, essv14200188, essv14200074, essv14200102, essv14200202, essv14200079, essv14200280, essv14200132, essv14200250, essv14200120, essv14200179, essv14200085, essv14200095, essv14200259, essv14200210, essv14200103, essv14200131, essv14200269, essv14200173, essv14200258, essv14200244, essv14200167, essv14200160, essv14200182, essv14200208, essv14200273, essv14200113, essv14200226, essv14200172, essv14200216, essv14200242, essv14200151, essv14200086, essv14200111, essv14200076, essv14200081, essv14200181, essv14200178, essv14200147, essv14200128, essv14200137, essv14200119, essv14200233, essv14200154, essv14200141, essv14200098, essv14200084, essv14200235, essv14200214, essv14200136

Samples

NA07000, HG01112, HG01695, HG00553, NA11832, HG00255, NA19676, HG03989, HG01516, NA20511, HG00096, HG01485, HG00189, HG00235, NA19648, HG01402, HG02496, HG02652, HG01098, HG01356, HG01303, HG00102, NA12286, HG01624, HG00384, HG00351, HG01079, HG01280, NA20531, NA11933, HG01066, HG00151, NA20532, NA20512, HG00318, HG00244, HG00181, HG01686, HG01531, HG03018, HG01947, HG00150, NA20517, NA12155, NA20806, HG01694, HG01513, HG00337, HG00327, NA12813, HG00138, NA12812, HG00251, HG01953, HG01702, NA20798, HG02105, HG01676, HG00173, NA20756, NA18619, HG01459, NA12348, HG01492, NA11992, HG00346, NA12287, HG01083, HG00334, NA19681, HG01982, HG01668, HG01393, HG01242, NA12761, HG01134, NA12275, HG04183, NA20819, HG01628, HG01519, HG00236, HG00325, NA19917, NA11932, HG00113, HG03691, NA12889, NA12815, HG01525, HG00182, HG03744, HG00160, HG01275, NA20587, HG00253, NA20753, NA12748, HG01256, HG01524, NA11831, HG01353, HG00349, HG00137, NA12777, HG01183, HG00290, HG00154, NA12760, NA12489, HG01248, HG00183, HG01501, HG01435, HG00380, HG02233, HG01122, NA20524, HG01384, HG02345, NA12342, HG02334, HG00360, NA20885, HG04107, HG01515, HG00101, HG03928, HG01879, HG02108, HG02554, NA20895, HG02731, HG00320, HG01768, HG00344, NA21118, NA21098, NA19658, NA20832, HG02221, HG01630, HG01047, HG01777, HG00250, HG01536, NA12249, HG04189, HG01130, HG01497, HG01705, HG02725, NA12144, HG01403, NA20828, HG01286, HG04159, HG00099, NA12778, HG02219, HG03774, NA20542, NA12546, NA20534, HG01700, HG01257, HG01148, NA20851, HG00382, NA20773, HG04219, NA20801, HG00336, HG00265, NA19749, HG01678, HG00375, HG01685, HG01362, HG00136, HG02651, HG01375, HG01494, HG01620, HG01137, HG00116, NA06986, HG00125, NA19759, NA20906, HG00111, HG01765, HG01770, HG02238, HG00329, HG00288, HG01302, HG01085, HG00123, NA12830, HG00310, HG00186, HG01631, HG00343, HG00105, HG01617, HG01756, NA11892, HG01378, HG00345

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3626736

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	210
Observed Complex	0
Frequency	n/a