A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3626688



Internal ID7013519
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:66166342..66171786hg38UCSC Ensembl
Innerchr11:66166355..66171774hg38UCSC Ensembl
Outerchr11:66166330..66171799hg38UCSC Ensembl
chr11:65933813..65939257hg19UCSC Ensembl
Innerchr11:65933826..65939245hg19UCSC Ensembl
Outerchr11:65933801..65939270hg19UCSC Ensembl
Cytoband11q13.2
Allele length
AssemblyAllele length
hg385445
hg195445
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv14193496, essv14193472, essv14193415, essv14193452, essv14193479, essv14193537, essv14193418, essv14193558, essv14193464, essv14193509, essv14193387, essv14193539, essv14193528, essv14193433, essv14193412, essv14193480, essv14193411, essv14193458, essv14193399, essv14193477, essv14193524, essv14193441, essv14193389, essv14193436, essv14193514, essv14193527, essv14193434, essv14193406, essv14193510, essv14193469, essv14193551, essv14193459, essv14193409, essv14193484, essv14193483, essv14193532, essv14193424, essv14193400, essv14193426, essv14193517, essv14193427, essv14193506, essv14193394, essv14193512, essv14193423, essv14193405, essv14193478, essv14193465, essv14193489, essv14193421, essv14193515, essv14193462, essv14193428, essv14193500, essv14193494, essv14193473, essv14193442, essv14193547, essv14193408, essv14193447, essv14193481, essv14193560, essv14193513, essv14193403, essv14193549, essv14193471, essv14193475, essv14193446, essv14193545, essv14193468, essv14193487, essv14193416, essv14193402, essv14193521, essv14193516, essv14193414, essv14193429, essv14193497, essv14193432, essv14193529, essv14193543, essv14193398, essv14193522, essv14193456, essv14193546, essv14193488, essv14193491, essv14193449, essv14193396, essv14193533, essv14193476, essv14193498, essv14193463, essv14193554, essv14193454, essv14193386, essv14193507, essv14193392, essv14193530, essv14193419, essv14193470, essv14193443, essv14193534, essv14193404, essv14193457, essv14193385, essv14193460, essv14193492, essv14193482, essv14193559, essv14193410, essv14193525, essv14193391, essv14193450, essv14193444, essv14193425, essv14193553, essv14193388, essv14193490, essv14193440, essv14193519, essv14193467, essv14193550, essv14193466, essv14193557, essv14193555, essv14193437, essv14193541, essv14193523, essv14193495, essv14193397, essv14193453, essv14193422, essv14193542, essv14193401, essv14193420, essv14193445, essv14193407, essv14193485, essv14193536, essv14193390, essv14193562, essv14193556, essv14193505, essv14193461, essv14193501, essv14193431, essv14193393, essv14193511, essv14193430, essv14193439, essv14193540, essv14193561, essv14193474, essv14193552, essv14193548, essv14193544, essv14193508, essv14193504, essv14193538, essv14193486, essv14193503, essv14193451, essv14193413, essv14193448, essv14193526, essv14193493, essv14193518, essv14193535, essv14193563, essv14193499, essv14193435, essv14193438, essv14193502, essv14193455, essv14193417, essv14193395, essv14193520, essv14193531
SamplesNA19431, HG03514, NA18502, HG02574, HG01060, NA19701, HG02339, HG03559, HG02890, NA19141, HG03378, HG02583, NA19909, HG03175, HG02318, HG03449, NA18877, HG03130, HG02804, HG03298, HG03280, HG03455, NA19393, NA19377, HG03515, HG03577, HG03172, NA19098, NA19920, NA20359, HG03095, HG03074, HG01250, HG03464, HG02621, HG02811, NA19315, HG01064, HG02485, NA18923, HG03485, HG02756, NA18916, HG03342, NA19197, HG03246, HG03479, HG01372, NA19904, HG01242, NA19130, HG02981, HG03209, NA19923, HG03460, HG01398, NA20278, HG03189, NA18874, NA19137, HG03212, HG02461, NA19385, HG02420, NA19026, NA20412, NA19901, HG02946, HG02427, NA19239, HG02260, NA18864, HG03267, NA19445, HG03583, NA20127, NA18867, NA19027, HG02819, HG02716, HG02009, HG02570, HG02439, NA19210, NA19175, NA19347, HG02511, NA19327, HG01879, NA18516, HG02450, HG03428, HG03575, HG02014, HG03027, HG02497, HG02976, HG02878, HG02537, HG03294, HG03123, HG03472, NA20299, HG03136, HG02817, HG02445, NA19042, NA19031, HG02309, HG03451, HG03391, HG02979, NA19257, NA19452, NA19225, NA19095, NA19395, HG01956, HG01896, HG03567, HG03064, HG02813, NA19206, HG02807, NA19834, NA19149, NA19147, NA18517, HG02799, NA20276, NA19019, HG02546, HG02983, HG01894, HG02721, NA19331, HG02923, NA20351, HG02611, NA20362, NA19835, NA19334, HG02982, HG03433, HG02941, NA19324, HG02317, HG01108, HG03419, HG02814, HG02771, HG01395, NA19117, NA20348, HG02971, HG02974, HG03157, NA19438, HG03279, NA19713, NA19474, HG01055, HG03258, HG02462, NA19185, HG03351, NA19102, HG03410, NA19096, NA19116, NA19213, HG02763, NA19146, HG03376, HG02851, NA18522, HG03198, HG03118, HG03303
Known GenesPACS1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3626688
Frequency
Sample Size2504
Observed Gain0
Observed Loss179
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer