A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3626596



Internal ID6666746
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:62177313..62177610hg38UCSC Ensembl
Innerchr11:62177313..62177610hg38UCSC Ensembl
Outerchr11:62177313..62177610hg38UCSC Ensembl
chr11:61944785..61945082hg19UCSC Ensembl
Innerchr11:61944785..61945082hg19UCSC Ensembl
Outerchr11:61944785..61945082hg19UCSC Ensembl
Cytoband11q12.3
Allele length
AssemblyAllele length
hg38298
hg19298
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv14179001, essv14178935, essv14178913, essv14178643, essv14179238, essv14179033, essv14179279, essv14178719, essv14178799, essv14179113, essv14178878, essv14178817, essv14178697, essv14178578, essv14179119, essv14178542, essv14179137, essv14178970, essv14178555, essv14178745, essv14178681, essv14178663, essv14178591, essv14178795, essv14178617, essv14178576, essv14178556, essv14179039, essv14178958, essv14178670, essv14179235, essv14179093, essv14178669, essv14178733, essv14178537, essv14179268, essv14178939, essv14178816, essv14179306, essv14179222, essv14179065, essv14179198, essv14179224, essv14178900, essv14179133, essv14179064, essv14178768, essv14178925, essv14178592, essv14179328, essv14179016, essv14179091, essv14179226, essv14178976, essv14178636, essv14179207, essv14178786, essv14178709, essv14179083, essv14178639, essv14179122, essv14178833, essv14178790, essv14179182, essv14178762, essv14179307, essv14179153, essv14179104, essv14178868, essv14178922, essv14179221, essv14179213, essv14178818, essv14178651, essv14179220, essv14178707, essv14179156, essv14179062, essv14178783, essv14179054, essv14179037, essv14178805, essv14178987, essv14179199, essv14179090, essv14178968, essv14178849, essv14179219, essv14179057, essv14179144, essv14178831, essv14179233, essv14179186, essv14178723, essv14179193, essv14179084, essv14178567, essv14178803, essv14179130, essv14179008, essv14179185, essv14179073, essv14178857, essv14179349, essv14179301, essv14179251, essv14179248, essv14179171, essv14178883, essv14178561, essv14178565, essv14178741, essv14179239, essv14179280, essv14178633, essv14178798, essv14178729, essv14178562, essv14178728, essv14178910, essv14178677, essv14179162, essv14179234, essv14178814, essv14178676, essv14178612, essv14178748, essv14179141, essv14178973, essv14178731, essv14179255, essv14178990, essv14179139, essv14179149, essv14179003, essv14178874, essv14178628, essv14179329, essv14178819, essv14178797, essv14178978, essv14179230, essv14178554, essv14178558, essv14178822, essv14179088, essv14179322, essv14179270, essv14179154, essv14179129, essv14178956, essv14178927, essv14178712, essv14178746, essv14178921, essv14178800, essv14178969, essv14178597, essv14179309, essv14179208, essv14178566, essv14178907, essv14179179, essv14178942, essv14179271, essv14178657, essv14179345, essv14179243, essv14178539, essv14179002, essv14178593, essv14178869, essv14178845, essv14178780, essv14179313, essv14178769, essv14178710, essv14178755, essv14179191, essv14178947, essv14178801, essv14179216, essv14179080, essv14179336, essv14178655, essv14178867, essv14179114, essv14179059, essv14178674, essv14179320, essv14179264, essv14179250, essv14178997, essv14178573, essv14178579, essv14178631, essv14178618, essv14178840, essv14178856, essv14179333, essv14178871, essv14179029, essv14178789, essv14178699, essv14178705, essv14179331, essv14179147, essv14178825, essv14179310, essv14179210, essv14179173, essv14178666, essv14179261, essv14178582, essv14178807, essv14178750, essv14179192, essv14179112, essv14179229, essv14178991, essv14178898, essv14179038, essv14178866, essv14178659, essv14179214, essv14179049, essv14178793, essv14179292, essv14178614, essv14178858, essv14178836, essv14178950, essv14178850, essv14179194, essv14178854, essv14179346, essv14179183, essv14179237, essv14178588, essv14178952, essv14178889, essv14179020, essv14178560, essv14179324, essv14179159, essv14179124, essv14179294, essv14179181, essv14179175, essv14179051, essv14178649, essv14178823, essv14178781, essv14179111, essv14179354, essv14179202, essv14179060, essv14179225, essv14178698, essv14179161, essv14179101, essv14179022, essv14178577, essv14178625, essv14179025, essv14178687, essv14179339, essv14178998, essv14178609, essv14179190, essv14178967, essv14178778, essv14178859, essv14179096, essv14178646, essv14179055, essv14178908, essv14179252, essv14178761, essv14178945, essv14179115, essv14179285, essv14179277, essv14179087, essv14178760, essv14178779, essv14178584, essv14178830, essv14179334, essv14179282, essv14178665, essv14178594, essv14178607, essv14178661, essv14178627, essv14178679, essv14178894, essv14178727, essv14178804, essv14179000, essv14178879, essv14178581, essv14178934, essv14178640, essv14179043, essv14178901, essv14178648, essv14178842, essv14179105, essv14178583, essv14178689, essv14179195, essv14178770, essv14178630, essv14179303, essv14179254, essv14178865, essv14178954, essv14178974, essv14179165, essv14178843, essv14179061, essv14178963, essv14178796, essv14178880, essv14178668, essv14178641, essv14179169, essv14178708, essv14178864, essv14178686, essv14178711, essv14179085, essv14178644, essv14178993, essv14178802, essv14179041, essv14179316, essv14179099, essv14179018, essv14179281, essv14179341, essv14178893, essv14178872, essv14179151, essv14178835, essv14179228, essv14179211, essv14179201, essv14178909, essv14178700, essv14178673, essv14179047, essv14178827, essv14178547, essv14178940, essv14178642, essv14178895, essv14179118, essv14178773, essv14179108, essv14178915, essv14179066, essv14179040, essv14179152, essv14178837, essv14178813, essv14178608, essv14179342, essv14178923, essv14179030, essv14179348, essv14179236, essv14178920, essv14178809, essv14178932, essv14178791, essv14179265, essv14179276, essv14179352, essv14179338, essv14178943, essv14178965, essv14178667, essv14179351, essv14179082, essv14178986, essv14179340, essv14178914, essv14178619, essv14178570, essv14178652, essv14179304, essv14179269, essv14178989, essv14178811, essv14179189, essv14179168, essv14179067, essv14178981, essv14178946, essv14178694, essv14179257, essv14179314, essv14179094, essv14178985, essv14178602, essv14179289, essv14179019, essv14178678, essv14178595, essv14179128, essv14178911, essv14179273, essv14178844, essv14178571, essv14179274, essv14179078, essv14178926, essv14179308, essv14178903, essv14178620, essv14178586, essv14179075, essv14178580, essv14179170, essv14179107, essv14178672, essv14178863, essv14179300, essv14178953, essv14178589, essv14179004, essv14179295, essv14178887, essv14178548, essv14179146, essv14178764, essv14178637, essv14178622, essv14179131, essv14179321, essv14179212, essv14178574, essv14179077, essv14178540, essv14178757, essv14178754, essv14179242, essv14178891, essv14178832, essv14179167, essv14178794, essv14179017, essv14178928, essv14179155, essv14178838, essv14178941, essv14178918, essv14178808, essv14178992, essv14179121, essv14178721, essv14179315, essv14178551, essv14178691, essv14178604, essv14178870, essv14178739, essv14178961, essv14178653, essv14178675, essv14178812, essv14179072, essv14178735, essv14178979, essv14178936, essv14178792, essv14178615, essv14179286, essv14178888, essv14179325, essv14179135, essv14179343, essv14179110, essv14178713, essv14179011, essv14179058, essv14179350, essv14179297, essv14178730, essv14178611, essv14178904, essv14179005, essv14179166, essv14179026, essv14179249, essv14179044, essv14179267, essv14179240, essv14178704, essv14178902, essv14178777, essv14178722, essv14178634, essv14178906, essv14178645, essv14179007, essv14178765, essv14178747, essv14179197, essv14179299, essv14179223, essv14179187, essv14179302, essv14179244, essv14178553, essv14179098, essv14178984, essv14178632, essv14179126, essv14178916, essv14179319, essv14179157, essv14179203, essv14178785, essv14179323, essv14178718, essv14178752, essv14178671, essv14178684, essv14178853, essv14178815, essv14178635, essv14179247, essv14179031, essv14178759, essv14178995, essv14178771, essv14178680, essv14179081, essv14178964, essv14179188, essv14178806, essv14179035, essv14178660, essv14178982, essv14178834, essv14179015, essv14178881, essv14178690, essv14179305, essv14179116, essv14179006, essv14178890, essv14178784, essv14179070, essv14178948, essv14178552, essv14179069, essv14179256, essv14179074, essv14178855, essv14179196, essv14179231, essv14179163, essv14178740, essv14179160, essv14178999, essv14179260, essv14178988, essv14178994, essv14179312, essv14178862, essv14178534, essv14178972, essv14179284, essv14179205, essv14179095, essv14179337, essv14178975, essv14178873, essv14178629, essv14179283, essv14178826, essv14178912, essv14179241, essv14179050, essv14178933, essv14178549, essv14178896, essv14179176, essv14178587, essv14178601, essv14178919, essv14178758, essv14178626, essv14178664, essv14179013, essv14178544, essv14179330, essv14178929, essv14178905, essv14179076, essv14179045, essv14178924, essv14178829, essv14179335, essv14179278, essv14178682, essv14179102, essv14179021, essv14179272, essv14179125, essv14178966, essv14178828, essv14178787, essv14179298, essv14178810, essv14179296, essv14179136, essv14178695, essv14179089, essv14178962, essv14179178, essv14178944, essv14179259, essv14179142, essv14178821, essv14179184, essv14179227, essv14178930, essv14178756, essv14179100, essv14179027, essv14178753, essv14179097, essv14178744, essv14178957, essv14178931, essv14178714, essv14178662, essv14178848, essv14179123, essv14178774, essv14179275, essv14178703, essv14179172, essv14178624, essv14179245, essv14179012, essv14179232, essv14179036, essv14178860, essv14179353, essv14179086, essv14178899, essv14178616, essv14178535, essv14179209, essv14178977, essv14178751, essv14179079, essv14178610, essv14178563, essv14179140, essv14178763, essv14179326, essv14178606, essv14178847, essv14178605, essv14179106, essv14178882, essv14179327, essv14179293, essv14178917, essv14178876, essv14178557, essv14179332, essv14179218, essv14178585, essv14179215, essv14179023, essv14178937, essv14178897, essv14179164, essv14178599, essv14178938, essv14178749, essv14178737, essv14178775, essv14179046, essv14178983, essv14178886, essv14178852, essv14179311, essv14178841, essv14178701, essv14178572, essv14179158, essv14178724, essv14178861, essv14178568, essv14178603, essv14179266, essv14179177, essv14178951, essv14179103, essv14178717, essv14178656, essv14178600, essv14179258, essv14178536, essv14178550, essv14179071, essv14178742, essv14178743, essv14178685, essv14178706, essv14178767, essv14179117, essv14179180, essv14178885, essv14179263, essv14179143, essv14178738, essv14178971, essv14178839, essv14178564, essv14179344, essv14179134, essv14178692, essv14179063, essv14178569, essv14179291, essv14179024, essv14178546, essv14179246, essv14179206, essv14179290, essv14178683, essv14178726, essv14179056, essv14178892, essv14179217, essv14178654, essv14178621, essv14178959, essv14179317, essv14178559, essv14178696, essv14179048, essv14179109, essv14179068, essv14178598, essv14179288, essv14178732, essv14178545, essv14179287, essv14178960, essv14179053, essv14178788, essv14178623, essv14178590, essv14179127, essv14178766, essv14178575, essv14179200, essv14179262, essv14178772, essv14178949, essv14178716, essv14178650, essv14178980, essv14179132, essv14178725, essv14178715, essv14178543, essv14179253, essv14178638, essv14179092, essv14179010, essv14178720, essv14179028, essv14178736, essv14179052, essv14179145, essv14178541, essv14179014, essv14178955, essv14178875, essv14178693, essv14179204, essv14179042, essv14178846, essv14179009, essv14178596, essv14178688, essv14178820, essv14179318, essv14179347, essv14178782, essv14178877, essv14179174, essv14178884, essv14179034, essv14178996, essv14178538, essv14178824, essv14178702, essv14179120, essv14178776, essv14179148, essv14178658, essv14178613, essv14179150, essv14178734, essv14178647, essv14179138, essv14179032, essv14179355, essv14178851
SamplesNA20588, HG01986, HG01485, NA20339, HG03593, NA20529, HG01918, HG01965, HG00142, HG01443, NA19664, HG00384, HG01602, HG03247, NA12843, NA11920, HG03717, HG00257, HG00151, NA18999, HG00233, NA20512, HG02691, HG03455, NA19684, HG01461, HG02356, HG01704, HG03679, HG00337, NA12813, HG03603, HG01350, HG01325, HG00356, HG03385, HG00122, HG03722, NA20798, NA20589, HG02140, NA19678, HG01676, HG01167, HG04206, NA20756, HG03673, HG00129, NA18547, HG03913, NA18916, NA07048, HG03874, HG02299, NA11918, NA18582, NA12762, HG01063, HG00355, HG00311, HG01859, HG04033, HG00281, HG00139, HG00130, HG03817, NA19720, HG00335, NA20775, HG01519, NA20812, NA18868, HG03212, HG03947, HG01973, HG01950, HG01771, NA20757, HG03585, HG02409, HG01550, NA20515, NA19789, NA20755, NA19921, HG01565, HG00137, HG02943, NA20892, NA20535, HG00731, NA20800, NA18538, HG01867, HG00266, HG03685, HG01501, HG01122, HG02070, HG04146, HG04039, NA12878, HG03786, NA20521, HG01684, HG01095, NA20810, NA20760, HG02253, NA19717, HG03711, HG03775, NA20519, NA20876, HG01047, HG03829, NA20903, HG01762, NA20901, NA19084, NA12829, NA11893, HG04173, HG01613, NA19750, NA06989, HG01130, HG04063, HG01334, HG02256, NA19682, HG02286, HG00099, HG02219, HG01988, NA19625, HG02127, HG01625, HG01107, HG03720, NA20799, NA19729, HG00382, HG04025, HG03598, NA19652, HG04216, NA21144, HG04026, HG02088, NA20870, NA12873, HG02391, HG01174, HG02232, HG01866, NA21095, HG01620, NA19360, HG01342, NA12347, HG03703, NA20906, NA20897, HG03600, HG02700, HG02379, HG02128, HG02971, NA19785, NA18631, HG03157, NA18873, HG01631, HG01269, NA19770, HG02291, NA20826, HG03401, HG02348, HG01914, HG00274, HG02947, HG01920, HG01756, HG02351, HG03985, HG03815, HG01776, HG01437, HG01618, NA11832, HG03989, HG01507, HG03690, HG00096, HG00114, HG01746, HG01441, NA19648, HG00121, NA19794, HG02272, HG01303, HG03965, HG01961, NA12814, HG03821, HG01537, HG01079, HG00100, HG02262, HG02035, HG04202, NA19704, HG01188, HG02275, HG01374, HG00306, HG03558, HG04094, HG01305, NA20321, HG02277, NA12004, HG03772, NA12058, HG02394, HG00150, NA20507, NA19669, NA19190, HG02285, NA12413, HG01924, HG01500, HG01341, HG01503, NA12812, HG00251, HG00109, HG03796, HG01064, HG02541, HG00173, NA19723, HG03937, HG03765, NA19916, HG01945, HG01710, NA19131, HG01816, HG00610, NA19649, HG01354, NA12287, HG03911, NA18498, HG04131, NA20513, NA19681, NA19922, NA12761, HG03851, HG01893, HG01134, NA12282, HG00277, HG02493, HG00120, HG02003, HG00106, HG02224, HG01170, HG01757, NA19719, HG01767, HG03624, HG00182, HG03744, NA19725, NA18520, HG00637, HG00338, NA20764, NA19209, NA20587, HG01605, HG00419, HG03884, NA21122, HG01603, NA20818, HG01784, HG00188, HG00149, HG03780, HG00183, HG00176, NA20858, HG04225, NA20524, HG03787, HG02334, HG02236, HG03760, HG01344, HG02511, HG00475, HG01612, HG04035, HG03756, NA19776, HG01777, HG01094, HG01161, HG01619, HG01414, NA19655, HG00373, HG00110, HG02048, HG02008, HG04155, HG01383, NA20881, HG01182, HG03740, HG01705, HG01708, HG01679, NA19225, NA06985, HG01403, NA20828, HG00141, NA19160, NA21142, NA20542, HG02399, HG01990, HG01700, HG00128, HG03567, NA19401, HG04219, HG02282, NA20801, HG04134, NA18952, NA12775, NA19749, HG00742, HG01362, HG01253, HG00638, HG01623, NA20504, NA19786, HG00319, HG01108, NA20803, HG00256, NA21094, HG03419, HG01991, HG02181, HG00672, HG01917, HG02238, NA20582, HG00378, HG01783, HG00174, NA12830, NA20807, HG01617, NA07056, HG03922, HG01464, HG01583, HG01976, HG02386, NA20761, HG02658, HG01412, HG01173, HG00304, HG04096, HG00143, HG03121, HG02072, HG01462, HG00102, NA20766, NA12286, HG01624, NA20508, HG01610, HG00242, NA19204, NA12273, NA20783, HG03111, NA20514, HG04158, HG02784, HG02122, HG01066, HG00244, NA18639, NA20294, HG00115, HG01947, HG01051, HG03999, HG01522, NA18627, HG03009, HG01513, HG00271, HG03782, HG02792, NA20814, NA18519, HG00272, HG04038, HG02016, NA19764, HG03808, NA19307, HG02383, HG01168, HG00238, HG02085, HG04182, HG02301, HG01761, NA20822, NA07347, HG03224, HG00185, NA19130, HG02278, NA20539, NA19923, HG02143, NA12275, HG01069, HG01080, NA20518, NA12156, HG00325, HG00232, HG00113, NA11994, HG01525, HG04020, HG03814, HG00160, HG01048, HG01133, HG01709, HG01121, HG01626, NA21105, HG00365, HG02164, NA20753, HG01256, HG00743, HG01124, HG00349, HG00154, HG00380, HG00282, HG00332, HG02345, HG00557, HG00245, HG00360, NA21119, HG03990, HG00732, HG04195, HG00101, HG01882, HG00368, HG01979, HG00132, HG02775, HG00556, HG01768, HG01142, HG00263, HG01941, HG00275, HG02522, HG01345, HG01077, HG03805, HG01323, HG01675, HG01607, HG01889, HG00239, HG00740, NA20525, HG00324, NA20867, NA11919, HG03730, HG01536, NA20581, HG02787, HG02657, HG01474, NA12144, HG01680, HG03898, HG00246, HG00240, NA12546, HG01956, HG01075, NA19017, HG02660, HG01148, HG02330, HG00258, HG00155, NA21117, HG00383, HG00254, HG04227, HG00265, NA19149, HG01678, HG01131, HG00353, HG02220, HG01878, NA12272, HG01685, HG01551, HG00734, HG02304, HG01396, NA20790, NA20530, NA20527, NA20778, NA20902, NA19679, NA19324, NA20544, HG01137, HG03727, NA19783, HG01489, HG00339, HG01086, HG02694, HG02095, HG03642, HG00259, HG02147, NA20849, HG03733, HG02235, HG01302, NA19185, HG00310, NA20786, HG01600, NA11843, NA20758, NA19780, HG01468, HG01479, HG00105, NA20502, HG01431, NA11892, HG01125, HG00171, NA12006, NA19463, NA20585, HG04153, HG03955, HG01786, NA20754, NA19346, NA19214, HG03166, HG01516, HG03741, HG03800, NA19222, HG01521, HG01356, NA20543, HG00231, NA20877, HG01438, NA11829, HG02298, HG01773, HG03237, HG00187, NA20274, HG03767, HG04211, HG02337, HG02318, HG01280, HG01970, NA20532, HG00640, NA19795, HG03130, HG00103, HG01686, HG01531, HG00364, NA20805, HG03963, HG01944, HG00566, HG01971, HG03895, HG03667, HG00179, HG03792, HG00177, HG01632, HG00879, NA19314, HG01694, HG01140, HG00622, HG03235, HG01571, NA19792, HG04100, HG00127, NA20796, NA18944, HG02153, HG01070, NA19762, HG01997, NA20586, HG03976, NA19198, HG00346, NA19771, NA19138, HG00369, HG01393, HG02111, HG01242, NA20910, NA19404, HG01067, HG00379, HG03968, HG02512, HG01628, NA18977, HG01495, HG01072, HG01281, NA19731, HG01369, HG01308, HG03696, HG01673, HG01440, NA20811, NA19901, HG00159, HG03267, HG02180, NA18640, HG04029, HG03048, HG00739, HG00264, HG01312, HG01942, NA21106, NA11831, NA10847, HG00313, HG01183, HG00290, HG03902, HG03785, HG02265, HG03054, HG01248, HG01187, HG02233, HG00145, HG01247, HG00328, HG01104, NA20505, NA12003, HG00190, HG01271, HG01162, HG04107, HG01515, HG02108, NA20895, NA18939, HG00320, NA20506, NA20126, NA19658, HG02968, HG02102, NA20767, HG00619, HG01615, HG00273, NA19774, HG04054, NA11894, NA20538, HG03974, HG01791, HG00321, HG00157, HG03745, HG03634, HG02292, NA19338, NA19257, HG02031, NA20534, HG01204, HG01530, NA20765, HG01992, NA20821, HG02455, HG01444, NA20773, NA19206, HG03778, NA12716, HG03809, HG01190, HG00285, NA19321, HG02223, HG02049, HG00366, NA19473, HG02696, HG02682, HG00357, HG03899, NA19037, NA20804, HG02651, NA20785, HG01933, NA20516, HG02139, NA20797, NA07037, NA06986, HG00269, HG04141, HG00107, HG00111, HG00371, HG01770, HG01491, HG03896, HG02230, HG01556, HG03863, HG01254, HG03022, HG00123, HG01089, HG02239, HG00234, HG03894, HG01781, HG02186, HG01251, NA20886, HG01775, HG01378, NA19755, HG01082, NA19758, HG04056, HG02425, NA20763, HG01566, NA18511, NA07000, HG01869, HG01672, HG01112, HG03698, HG01923, HG01578, HG01695, HG01061, HG00978, NA12776, HG03886
Known Genes
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3626596
Frequency
Sample Size2504
Observed Gain0
Observed Loss822
Observed Complex0
Frequencyn/a


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