A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3626563



Internal ID7013395
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:60677909..60678333hg38UCSC Ensembl
Innerchr11:60677909..60678333hg38UCSC Ensembl
Outerchr11:60677909..60678333hg38UCSC Ensembl
chr11:60445382..60445806hg19UCSC Ensembl
Innerchr11:60445382..60445806hg19UCSC Ensembl
Outerchr11:60445382..60445806hg19UCSC Ensembl
Cytoband11q12.2
Allele length
AssemblyAllele length
hg38425
hg19425
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv14176003, essv14175942, essv14176099, essv14176002, essv14176094, essv14176005, essv14176107, essv14175960, essv14176090, essv14175955, essv14175992, essv14175976, essv14176114, essv14175966, essv14175984, essv14175951, essv14176068, essv14176007, essv14175982, essv14175938, essv14175931, essv14176105, essv14176085, essv14176080, essv14176031, essv14176082, essv14175939, essv14175940, essv14176047, essv14175929, essv14175933, essv14176033, essv14176111, essv14175967, essv14175953, essv14175986, essv14176069, essv14175962, essv14176049, essv14176087, essv14175956, essv14176014, essv14176000, essv14175978, essv14176032, essv14175995, essv14176034, essv14176063, essv14176054, essv14175943, essv14175957, essv14176012, essv14176059, essv14176067, essv14176037, essv14176078, essv14176028, essv14176044, essv14176009, essv14176106, essv14176095, essv14176050, essv14175937, essv14176083, essv14175989, essv14176018, essv14176096, essv14175930, essv14176035, essv14176023, essv14176062, essv14176058, essv14175998, essv14175975, essv14175958, essv14176089, essv14175935, essv14176102, essv14176098, essv14176079, essv14176008, essv14176021, essv14176115, essv14176103, essv14176086, essv14175996, essv14176112, essv14176109, essv14176055, essv14176084, essv14176040, essv14175945, essv14175934, essv14176108, essv14176046, essv14176081, essv14176110, essv14175988, essv14176026, essv14176076, essv14175949, essv14176045, essv14176043, essv14175991, essv14175946, essv14175993, essv14176060, essv14175954, essv14176077, essv14176013, essv14175990, essv14175970, essv14175977, essv14176016, essv14176097, essv14175987, essv14175983, essv14175973, essv14176072, essv14176057, essv14175947, essv14176075, essv14176073, essv14175961, essv14175959, essv14175950, essv14176010, essv14176052, essv14175974, essv14175963, essv14175985, essv14176071, essv14175981, essv14175965, essv14176093, essv14175932, essv14175972, essv14176070, essv14175997, essv14176029, essv14175948, essv14176042, essv14176104, essv14176092, essv14175964, essv14176101, essv14176001, essv14176015, essv14176088, essv14176051, essv14176011, essv14175980, essv14176036, essv14176027, essv14175971, essv14176039, essv14176024, essv14175941, essv14175936, essv14176113, essv14176091, essv14176074, essv14176116, essv14176056, essv14176066, essv14176048, essv14176020, essv14175968, essv14176019, essv14176053, essv14176030, essv14175999, essv14176025, essv14175994, essv14176100, essv14176017, essv14176064, essv14175944, essv14176022, essv14176006, essv14176065, essv14176038, essv14176061, essv14176041, essv14176004, essv14175969, essv14175979, essv14175952
SamplesHG00626, NA18998, HG01413, HG01850, HG00650, HG01795, HG01098, HG01918, HG01054, HG01303, HG01961, HG01031, NA18565, HG02262, HG01326, HG01970, HG00457, NA19795, NA18639, NA18486, HG03298, HG02277, HG02058, HG03229, NA21137, NA19684, NA18625, HG02271, HG03193, HG03139, HG02285, HG01140, HG00693, HG01924, HG01571, HG01250, NA19746, HG01350, NA18944, NA19319, HG01953, HG02151, NA19315, HG02407, HG01351, NA18595, HG02140, HG01997, HG01277, NA19307, HG02155, HG01968, HG01459, HG01945, HG01599, HG03105, HG00851, NA19054, HG01365, HG00451, HG00537, HG03619, HG01080, HG01170, NA19731, HG01369, HG01308, HG01176, NA18986, NA18966, HG01973, HG02178, NA18990, HG02104, HG01844, HG02260, HG01121, HG01275, NA18640, NA18539, NA19007, NA18605, HG02265, HG00731, HG02136, HG01867, HG01360, HG01187, HG00982, NA19707, HG03511, HG02075, HG01384, HG01247, NA19077, NA12003, HG02380, HG00732, HG02076, HG01938, HG01979, HG00556, HG00533, HG00500, HG03159, HG01323, HG01796, HG01029, HG01049, NA18757, NA18537, HG03311, HG01447, HG01392, HG01161, HG01414, NA20299, HG00690, HG02259, HG01921, HG01101, NA18553, HG01497, HG02081, NA19761, NA19009, HG01988, NA18541, NA19012, NA18546, HG01363, NA19729, HG00476, HG02089, NA18533, HG01597, NA18543, NA18559, NA19735, NA19434, HG01131, NA19732, HG01551, HG02304, HG01272, NA19010, HG01598, HG00631, HG02179, HG01951, HG02274, NA19360, NA19783, HG02019, NA18615, HG01489, HG03112, HG02974, HG02401, HG01917, HG02367, HG02147, HG01935, NA18987, HG02032, HG02938, HG01254, HG01269, HG01817, HG00698, NA19726, NA18876, HG02291, HG00728, HG01251, NA19661, HG01920, HG01464, HG01378, HG01082, HG01125, HG01097, HG01191, HG01923, HG01061, NA19676, HG01976, HG01926
Known GenesLINC00301
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3626563
Frequency
Sample Size2504
Observed Gain0
Observed Loss188
Observed Complex0
Frequencyn/a


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