Variant Details

Variant: esv3626207

Internal ID

6666356

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr11:47740353..47741702	hg38	UCSC Ensembl
Inner	chr11:47740353..47741702	hg38	UCSC Ensembl
Outer	chr11:47739911..47742063	hg38	UCSC Ensembl
	chr11:47761905..47763254	hg19	UCSC Ensembl
Inner	chr11:47761905..47763254	hg19	UCSC Ensembl
Outer	chr11:47761463..47763615	hg19	UCSC Ensembl

Cytoband

11p11.2

Allele length

Assembly	Allele length
hg38	1350
hg19	1350

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv14121324, essv14121348, essv14121375, essv14121352, essv14121351, essv14121365, essv14121379, essv14121390, essv14121325, essv14121329, essv14121335, essv14121343, essv14121388, essv14121356, essv14121341, essv14121327, essv14121376, essv14121340, essv14121374, essv14121353, essv14121372, essv14121373, essv14121337, essv14121382, essv14121354, essv14121370, essv14121381, essv14121338, essv14121383, essv14121363, essv14121360, essv14121395, essv14121399, essv14121393, essv14121362, essv14121400, essv14121328, essv14121339, essv14121389, essv14121358, essv14121368, essv14121336, essv14121334, essv14121366, essv14121377, essv14121369, essv14121378, essv14121396, essv14121350, essv14121392, essv14121330, essv14121391, essv14121367, essv14121342, essv14121371, essv14121386, essv14121347, essv14121384, essv14121385, essv14121394, essv14121397, essv14121398, essv14121331, essv14121380, essv14121326, essv14121346, essv14121332, essv14121349, essv14121344, essv14121355, essv14121345, essv14121333, essv14121323, essv14121361, essv14121357, essv14121364, essv14121359, essv14121387

Samples

HG03136, NA19026, NA19819, HG02546, HG03066, NA20535, HG03196, HG02255, HG02318, HG02419, HG03301, HG03057, HG02014, HG02952, NA18517, HG03124, NA19338, HG02977, HG03458, HG02322, HG01461, HG01134, HG02613, HG02323, NA19355, HG03378, NA19467, HG03376, HG00266, NA18934, NA20356, NA19197, HG02554, HG02577, HG03439, HG03464, HG02143, NA19835, HG03565, NA19700, HG00114, HG00373, HG02283, NA19360, HG02814, NA19129, NA19206, HG03455, NA18498, NA18522, NA19238, HG02558, HG03518, NA19909, HG03073, HG02307, HG03297, HG03577, NA19307, HG03115, HG01880, HG02339, HG02624, HG02484, HG02819, NA20276, HG02953, HG02628, NA19099, HG01485, HG02465, HG02476, HG03060, NA19448, HG01890, NA19750, HG01354, HG03082

Known Genes

FNBP4

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3626207

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	78
Observed Complex	0
Frequency	n/a