Variant Details

Variant: esv3625559

Internal ID

6665707

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr11:20748768..20749177	hg38	UCSC Ensembl
Inner	chr11:20748769..20749176	hg38	UCSC Ensembl
Outer	chr11:20748767..20749178	hg38	UCSC Ensembl
	chr11:20770314..20770723	hg19	UCSC Ensembl
Inner	chr11:20770315..20770722	hg19	UCSC Ensembl
Outer	chr11:20770313..20770724	hg19	UCSC Ensembl

Cytoband

11p15.1

Allele length

Assembly	Allele length
hg38	410
hg19	410

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv14047363, essv14047333, essv14047344, essv14047341, essv14047345, essv14047339, essv14047320, essv14047328, essv14047349, essv14047322, essv14047324, essv14047355, essv14047330, essv14047354, essv14047357, essv14047331, essv14047362, essv14047351, essv14047334, essv14047342, essv14047325, essv14047348, essv14047332, essv14047321, essv14047347, essv14047335, essv14047343, essv14047356, essv14047350, essv14047329, essv14047352, essv14047326, essv14047319, essv14047327, essv14047360, essv14047340, essv14047353, essv14047346, essv14047361, essv14047358, essv14047336, essv14047323, essv14047337, essv14047318, essv14047359, essv14047338

Samples

NA19394, NA19028, NA19700, NA19703, NA19397, NA18861, NA19399, HG02702, HG03111, HG02836, NA18877, NA18486, NA19393, NA19314, HG03436, HG03091, HG03342, NA20278, NA20412, NA19901, NA19456, HG03343, NA19247, NA18934, NA19184, NA19236, NA18871, NA19449, HG03078, HG02666, NA18858, HG02675, NA19436, NA19035, HG03117, NA19428, HG02839, NA19475, NA19328, HG02974, HG03025, HG02646, NA19093, NA19102, NA19030, HG02805

Known Genes

NELL1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3625559

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	46
Observed Complex	0
Frequency	n/a