A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3624116



Internal ID6664283
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:87893067..87893967hg38UCSC Ensembl
Innerchr10:87893068..87893967hg38UCSC Ensembl
Outerchr10:87893067..87893968hg38UCSC Ensembl
chr10:89652824..89653724hg19UCSC Ensembl
Innerchr10:89652825..89653724hg19UCSC Ensembl
Outerchr10:89652824..89653725hg19UCSC Ensembl
Cytoband10q23.31
Allele length
AssemblyAllele length
hg38901
hg19901
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13887887, essv13887871, essv13887891, essv13887868, essv13887890, essv13887865, essv13887907, essv13887876, essv13887867, essv13887882, essv13887879, essv13887870, essv13887895, essv13887904, essv13887900, essv13887892, essv13887896, essv13887875, essv13887881, essv13887885, essv13887872, essv13887901, essv13887889, essv13887897, essv13887894, essv13887873, essv13887866, essv13887880, essv13887899, essv13887893, essv13887908, essv13887883, essv13887877, essv13887898, essv13887888, essv13887869, essv13887874, essv13887903, essv13887902, essv13887886, essv13887878, essv13887884, essv13887905, essv13887906
SamplesHG01441, HG04131, NA12043, HG00743, HG01519, NA19404, HG00129, HG00384, NA19319, HG00375, HG04183, HG01537, NA20539, NA07051, HG01608, HG01504, NA12414, NA20532, HG01765, HG00339, HG00358, HG00121, HG00141, HG00150, HG01253, HG00237, HG00267, HG01437, HG01191, NA19384, NA19716, NA06986, HG01455, HG01676, HG00277, HG01259, NA10851, HG01345, HG01632, HG01269, NA12760, HG00272, NA20538, HG00271
Known GenesPTEN
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3624116
Frequency
Sample Size2504
Observed Gain0
Observed Loss44
Observed Complex0
Frequencyn/a


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