Variant Details

Variant: esv3623741

Internal ID

7010597

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr10:69297614..69300767	hg38	UCSC Ensembl
Inner	chr10:69297620..69300762	hg38	UCSC Ensembl
Outer	chr10:69297609..69300773	hg38	UCSC Ensembl
	chr10:71057370..71060523	hg19	UCSC Ensembl
Inner	chr10:71057376..71060518	hg19	UCSC Ensembl
Outer	chr10:71057365..71060529	hg19	UCSC Ensembl

Cytoband

10q22.1

Allele length

Assembly	Allele length
hg38	3154
hg19	3154

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv13855059, essv13855051, essv13855018, essv13855039, essv13855060, essv13855078, essv13855055, essv13855070, essv13855052, essv13855046, essv13855038, essv13855025, essv13855058, essv13855035, essv13855017, essv13855076, essv13855072, essv13855006, essv13855045, essv13855063, essv13855016, essv13855020, essv13855013, essv13855048, essv13855023, essv13855034, essv13855024, essv13855029, essv13855026, essv13855007, essv13855008, essv13855067, essv13855065, essv13855053, essv13855005, essv13855030, essv13855068, essv13855003, essv13855041, essv13855069, essv13855066, essv13855014, essv13855050, essv13855009, essv13855073, essv13855031, essv13855054, essv13855077, essv13855071, essv13855042, essv13855032, essv13855062, essv13855075, essv13855022, essv13855027, essv13855074, essv13855004, essv13855036, essv13855015, essv13855056, essv13855064, essv13855040, essv13855011, essv13855043, essv13855019, essv13855033, essv13855037, essv13855010, essv13855044, essv13855057, essv13855021, essv13855028, essv13855061, essv13855047, essv13855012, essv13855049

Samples

HG02890, HG02628, HG03052, NA19204, HG01885, HG01079, HG03300, HG03449, NA18917, HG03558, HG02870, HG03521, HG03298, HG02624, HG03295, HG03126, HG03193, NA18870, HG03069, HG02895, HG03572, HG03436, HG03135, HG02840, NA19198, HG02756, HG03105, NA20287, NA19130, NA19041, NA18874, HG03268, HG02634, NA19159, HG03058, HG02623, NA19445, HG03583, HG02715, NA19200, HG02977, HG03132, NA19236, HG02322, HG01880, HG03202, HG02884, HG02309, HG02881, HG02283, HG03451, HG02979, HG01890, HG03567, HG02772, NA20296, HG03064, HG03461, HG03437, HG01551, NA19331, HG02837, HG02317, NA19360, HG02814, HG02771, NA19376, NA19143, HG02646, HG02938, NA20289, NA19096, HG03470, HG03445, HG01111, HG02629

Known Genes

HK1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3623741

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	76
Observed Complex	0
Frequency	n/a