A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3623121



Internal ID6663289
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:46399372..46400990hg38UCSC Ensembl
Innerchr10:46399388..46400973hg38UCSC Ensembl
Outerchr10:46399355..46401006hg38UCSC Ensembl
chr10:47148773..47150391hg19UCSC Ensembl
Innerchr10:47148790..47150375hg19UCSC Ensembl
Outerchr10:47148757..47150408hg19UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg381619
hg191619
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13784824, essv13784858, essv13784825, essv13784814, essv13784826, essv13784846, essv13784819, essv13784835, essv13784873, essv13784847, essv13784844, essv13784854, essv13784851, essv13784868, essv13784857, essv13784817, essv13784830, essv13784828, essv13784866, essv13784822, essv13784833, essv13784867, essv13784872, essv13784860, essv13784861, essv13784856, essv13784820, essv13784845, essv13784863, essv13784836, essv13784850, essv13784874, essv13784853, essv13784870, essv13784862, essv13784837, essv13784876, essv13784871, essv13784823, essv13784829, essv13784855, essv13784869, essv13784852, essv13784840, essv13784843, essv13784842, essv13784821, essv13784875, essv13784815, essv13784816, essv13784831, essv13784864, essv13784827, essv13784834, essv13784813, essv13784818, essv13784865, essv13784841, essv13784849, essv13784848, essv13784839, essv13784859, essv13784838, essv13784832
SamplesHG02666, HG02107, NA19712, HG02675, HG03479, HG01882, NA19209, HG02799, HG00131, NA19310, HG03247, NA18877, HG03419, HG02946, HG02884, NA19338, HG03298, NA19461, HG03401, HG01990, NA19701, NA19355, HG02973, NA19117, HG02585, HG02634, HG03202, HG02772, HG02012, HG03439, NA19096, HG02643, NA19440, HG01136, HG02595, HG03166, HG02283, HG02814, HG02325, NA19189, NA19206, HG02429, HG02479, NA19711, HG02614, HG03118, HG02624, HG03175, NA19376, NA19669, NA18909, NA19035, NA18867, HG03267, HG03025, HG03258, HG01912, NA19916, NA19204, HG02798, HG02013, NA19385, NA20339, HG02839
Known GenesLINC00842
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3623121
Frequency
Sample Size2504
Observed Gain0
Observed Loss64
Observed Complex0
Frequencyn/a


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