Variant Details

Variant: esv3621925

Internal ID

7008791

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr9:132883543..132884649	hg38	UCSC Ensembl
Inner	chr9:132883593..132884599	hg38	UCSC Ensembl
Outer	chr9:132883485..132884707	hg38	UCSC Ensembl
	chr9:135758930..135760036	hg19	UCSC Ensembl
Inner	chr9:135758980..135759986	hg19	UCSC Ensembl
Outer	chr9:135758872..135760094	hg19	UCSC Ensembl

Cytoband

9q34.13

Allele length

Assembly	Allele length
hg38	1107
hg19	1107

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv13638491, essv13638476, essv13638452, essv13638467, essv13638511, essv13638510, essv13638494, essv13638470, essv13638504, essv13638501, essv13638526, essv13638505, essv13638458, essv13638527, essv13638513, essv13638472, essv13638486, essv13638523, essv13638464, essv13638520, essv13638507, essv13638469, essv13638475, essv13638522, essv13638471, essv13638497, essv13638479, essv13638512, essv13638490, essv13638509, essv13638482, essv13638451, essv13638450, essv13638483, essv13638455, essv13638487, essv13638484, essv13638525, essv13638502, essv13638528, essv13638460, essv13638454, essv13638493, essv13638495, essv13638453, essv13638499, essv13638473, essv13638462, essv13638517, essv13638457, essv13638477, essv13638463, essv13638459, essv13638488, essv13638466, essv13638481, essv13638489, essv13638461, essv13638485, essv13638515, essv13638496, essv13638465, essv13638516, essv13638492, essv13638474, essv13638514, essv13638503, essv13638519, essv13638468, essv13638508, essv13638480, essv13638456, essv13638518, essv13638524, essv13638478, essv13638506, essv13638521, essv13638498, essv13638500

Samples

HG02386, HG04210, HG00304, NA19703, NA12273, HG01052, NA19332, NA21099, HG01815, NA19704, HG04211, HG03589, HG00457, HG03668, NA21115, HG00879, HG00327, NA19446, NA20861, HG03976, NA20769, HG02130, HG01816, NA18916, NA19054, HG02733, HG00334, HG00185, HG00311, HG03826, HG00867, NA19087, NA20811, NA19725, NA19189, HG03832, HG00323, NA18539, HG00464, HG00313, HG00133, HG02136, HG00368, HG00500, HG04035, HG03159, HG00651, HG00373, HG03391, HG02725, NA19625, HG00445, NA18542, HG03692, NA18941, HG02651, HG01108, NA19085, HG03779, HG02771, HG03565, HG02379, NA18631, HG00342, HG01846, HG03716, HG00186, HG01817, HG02186, NA20528, HG00372, HG00595, HG00628, NA18522, HG03698, HG00180, NA19074, HG00437, HG03265

Known Genes

C9orf9

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3621925

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	79
Observed Complex	0
Frequency	n/a