Variant Details

Variant: esv3621858

Internal ID

7008724

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr9:130268361..130272526	hg38	UCSC Ensembl
Inner	chr9:130268361..130272526	hg38	UCSC Ensembl
Outer	chr9:130268361..130272526	hg38	UCSC Ensembl
	chr9:133030640..133034805	hg19	UCSC Ensembl
Inner	chr9:133030640..133034805	hg19	UCSC Ensembl
Outer	chr9:133030640..133034805	hg19	UCSC Ensembl

Cytoband

9q34.11

Allele length

Assembly	Allele length
hg38	4166
hg19	4166

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv13629252, essv13629312, essv13629546, essv13629482, essv13629400, essv13629255, essv13629324, essv13629443, essv13629361, essv13629467, essv13629277, essv13629335, essv13629271, essv13629238, essv13629446, essv13629290, essv13629342, essv13629382, essv13629539, essv13629459, essv13629393, essv13629512, essv13629348, essv13629269, essv13629388, essv13629321, essv13629375, essv13629306, essv13629363, essv13629556, essv13629548, essv13629334, essv13629541, essv13629528, essv13629276, essv13629472, essv13629307, essv13629485, essv13629357, essv13629523, essv13629319, essv13629535, essv13629413, essv13629499, essv13629479, essv13629309, essv13629244, essv13629366, essv13629555, essv13629386, essv13629339, essv13629391, essv13629268, essv13629409, essv13629384, essv13629288, essv13629450, essv13629529, essv13629287, essv13629344, essv13629332, essv13629256, essv13629236, essv13629517, essv13629462, essv13629496, essv13629273, essv13629380, essv13629349, essv13629278, essv13629377, essv13629373, essv13629316, essv13629294, essv13629428, essv13629540, essv13629280, essv13629527, essv13629261, essv13629430, essv13629421, essv13629426, essv13629341, essv13629460, essv13629308, essv13629354, essv13629448, essv13629284, essv13629314, essv13629240, essv13629340, essv13629543, essv13629305, essv13629399, essv13629374, essv13629449, essv13629494, essv13629418, essv13629402, essv13629396, essv13629516, essv13629389, essv13629420, essv13629537, essv13629253, essv13629486, essv13629338, essv13629403, essv13629544, essv13629447, essv13629346, essv13629368, essv13629469, essv13629549, essv13629503, essv13629505, essv13629379, essv13629554, essv13629519, essv13629259, essv13629412, essv13629401, essv13629237, essv13629470, essv13629336, essv13629248, essv13629279, essv13629272, essv13629333, essv13629410, essv13629432, essv13629444, essv13629434, essv13629473, essv13629297, essv13629313, essv13629242, essv13629376, essv13629534, essv13629481, essv13629337, essv13629282, essv13629520, essv13629457, essv13629318, essv13629451, essv13629536, essv13629365, essv13629247, essv13629243, essv13629356, essv13629438, essv13629360, essv13629431, essv13629477, essv13629301, essv13629498, essv13629440, essv13629387, essv13629524, essv13629390, essv13629513, essv13629286, essv13629526, essv13629323, essv13629397, essv13629489, essv13629289, essv13629525, essv13629510, essv13629532, essv13629423, essv13629465, essv13629468, essv13629311, essv13629299, essv13629437, essv13629267, essv13629415, essv13629504, essv13629371, essv13629315, essv13629352, essv13629515, essv13629475, essv13629461, essv13629378, essv13629441, essv13629414, essv13629249, essv13629351, essv13629408, essv13629398, essv13629480, essv13629492, essv13629298, essv13629246, essv13629509, essv13629458, essv13629327, essv13629353, essv13629406, essv13629427, essv13629260, essv13629466, essv13629405, essv13629310, essv13629325, essv13629257, essv13629463, essv13629258, essv13629251, essv13629381, essv13629254, essv13629533, essv13629322, essv13629445, essv13629506, essv13629507, essv13629435, essv13629557, essv13629547, essv13629424, essv13629359, essv13629270, essv13629358, essv13629303, essv13629292, essv13629370, essv13629331, essv13629531, essv13629550, essv13629328, essv13629407, essv13629456, essv13629404, essv13629362, essv13629369, essv13629502, essv13629265, essv13629439, essv13629392, essv13629497, essv13629241, essv13629416, essv13629239, essv13629425, essv13629511, essv13629553, essv13629345, essv13629264, essv13629263, essv13629350, essv13629245, essv13629518, essv13629281, essv13629283, essv13629488, essv13629514, essv13629522, essv13629433, essv13629422, essv13629442, essv13629300, essv13629296, essv13629250, essv13629419, essv13629552, essv13629521, essv13629295, essv13629355, essv13629372, essv13629367, essv13629383, essv13629530, essv13629464, essv13629385, essv13629274, essv13629487, essv13629330, essv13629364, essv13629508, essv13629455, essv13629304, essv13629262, essv13629542, essv13629347, essv13629491, essv13629538, essv13629471, essv13629490, essv13629302, essv13629493, essv13629429, essv13629395, essv13629558, essv13629326, essv13629551, essv13629484, essv13629452, essv13629453, essv13629291, essv13629483, essv13629320, essv13629293, essv13629266, essv13629500, essv13629545, essv13629285, essv13629495, essv13629501, essv13629329, essv13629394, essv13629436, essv13629317, essv13629417, essv13629343, essv13629474, essv13629476, essv13629275, essv13629411, essv13629454, essv13629478

Samples

HG00189, NA20882, NA12717, NA20891, NA18647, NA21127, NA12273, HG04222, NA12414, NA21099, NA20514, HG02231, HG00233, NA20512, HG00244, HG00181, HG02691, HG01802, HG03229, NA20864, NA18959, NA20863, HG01704, HG00097, NA20771, NA20806, HG00337, HG00271, HG03782, NA18940, HG04038, HG00122, HG02690, HG03754, HG02069, HG01702, NA19764, HG01351, HG01277, HG02521, HG00129, NA07048, HG04182, HG03663, NA20822, NA11918, NA07347, HG03234, HG01528, HG00355, NA20287, HG00311, HG00243, HG00158, HG04033, HG03887, HG00148, NA20775, HG00325, NA11932, HG02187, HG00113, NA11994, HG03814, NA20889, NA20412, HG00118, HG01771, HG01133, NA20342, NA20757, HG03585, HG01550, HG00349, NA20904, NA20892, NA12489, NA20800, HG00268, HG03714, HG02793, NA19670, HG03718, HG00360, NA12878, HG01684, NA19455, HG01979, HG02731, HG03900, HG00263, HG03775, HG00275, NA12718, NA20875, NA18572, HG00239, HG01630, NA18548, NA18537, HG00324, HG03829, NA20903, HG00350, NA11893, HG03713, NA11840, HG02309, NA20856, NA06989, HG00140, HG04063, HG02783, HG02724, HG01474, HG01680, HG02332, NA18531, HG03898, HG00864, NA12546, HG01107, HG01257, NA12043, NA20872, NA19652, HG00336, NA21144, HG04026, NA18564, HG01678, NA12272, HG01551, HG01272, NA12873, NA20790, HG01375, HG03869, HG00237, NA19679, NA20544, HG00339, HG02133, HG03729, HG01785, HG01086, HG03600, NA06994, HG03642, HG00381, NA20847, HG01868, NA19779, HG03849, HG04014, NA20852, NA21133, NA20510, NA19780, HG00728, HG00274, HG00105, HG02353, HG01756, HG00171, NA12006, HG03815, HG01618, NA21120, HG01516, HG03741, NA18998, HG03812, NA20874, HG01746, HG01413, HG03800, HG03857, NA21097, HG03652, HG00231, NA20877, HG03965, NA11995, HG00361, HG04229, HG04211, NA18599, NA21092, HG03589, HG00306, NA20813, HG00103, HG03668, HG02277, HG01456, HG03895, HG00177, HG01632, NA12400, HG02285, NA12341, NA20846, HG01571, HG01503, HG01366, HG01682, HG03640, HG01779, HG03976, HG04144, HG01843, NA11992, HG03885, HG02655, NA12283, NA20540, NA12287, HG03629, HG00369, HG03762, NA12761, HG03803, HG00277, HG01455, NA19651, HG01067, NA20819, HG03595, HG01757, HG01527, HG03693, HG04238, NA20869, NA20845, HG03750, HG00178, NA20587, HG04029, NA18954, HG00108, HG01603, HG01524, NA11831, HG01136, HG00149, HG01248, NA20858, HG03007, HG02513, HG01104, HG02697, NA12872, HG03760, HG01790, NA20809, HG01344, HG04107, HG00533, NA20506, NA21118, NA20126, HG04180, HG01311, HG01414, NA19774, HG03824, NA19655, HG04054, HG00373, NA20859, HG00110, HG02048, HG01707, HG01504, NA20538, HG02649, HG04152, NA18945, NA20821, NA21087, NA20773, NA20522, HG02684, HG02282, NA20801, HG03790, HG01954, HG00375, HG00357, NA07051, NA12046, HG01623, HG00319, NA20516, NA19741, NA21094, HG03681, HG02181, HG01606, HG01770, HG01491, HG03789, HG02230, HG02699, HG02654, HG00174, NA12830, HG01089, HG03684, HG00234, NA19726, HG01872, HG03894, HG00372, HG04056, HG02425, NA20763, HG03890, HG01672, HG01112, HG01191, HG03686

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3621858

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	323
Observed Complex	0
Frequency	n/a