A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3621839



Internal ID6662015
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:129701704..129885823hg38UCSC Ensembl
chr9:132463983..132648102hg19UCSC Ensembl
Cytoband9q34.11
Allele length
AssemblyAllele length
hg38184120
hg19184120
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13628429, essv13628705, essv13628702, essv13628419, essv13628612, essv13628672, essv13628420, essv13628670, essv13628595, essv13628678, essv13628477, essv13628689, essv13628590, essv13628717, essv13628651, essv13628421, essv13628498, essv13628475, essv13628582, essv13628724, essv13628521, essv13628587, essv13628574, essv13628422, essv13628517, essv13628654, essv13628661, essv13628576, essv13628471, essv13628685, essv13628435, essv13628718, essv13628615, essv13628446, essv13628673, essv13628424, essv13628711, essv13628487, essv13628592, essv13628461, essv13628555, essv13628721, essv13628674, essv13628463, essv13628688, essv13628525, essv13628660, essv13628500, essv13628513, essv13628634, essv13628617, essv13628543, essv13628534, essv13628508, essv13628437, essv13628455, essv13628665, essv13628728, essv13628698, essv13628722, essv13628535, essv13628611, essv13628450, essv13628624, essv13628449, essv13628643, essv13628529, essv13628610, essv13628522, essv13628696, essv13628454, essv13628459, essv13628504, essv13628476, essv13628694, essv13628580, essv13628706, essv13628622, essv13628441, essv13628667, essv13628682, essv13628526, essv13628713, essv13628552, essv13628668, essv13628680, essv13628652, essv13628640, essv13628460, essv13628490, essv13628514, essv13628630, essv13628683, essv13628644, essv13628648, essv13628483, essv13628533, essv13628474, essv13628497, essv13628691, essv13628532, essv13628527, essv13628516, essv13628467, essv13628531, essv13628597, essv13628669, essv13628658, essv13628563, essv13628506, essv13628583, essv13628638, essv13628503, essv13628584, essv13628510, essv13628478, essv13628594, essv13628591, essv13628686, essv13628664, essv13628537, essv13628539, essv13628662, essv13628629, essv13628423, essv13628443, essv13628599, essv13628723, essv13628657, essv13628562, essv13628464, essv13628636, essv13628600, essv13628502, essv13628486, essv13628692, essv13628701, essv13628663, essv13628646, essv13628557, essv13628445, essv13628556, essv13628609, essv13628714, essv13628493, essv13628457, essv13628684, essv13628699, essv13628511, essv13628558, essv13628627, essv13628541, essv13628481, essv13628470, essv13628452, essv13628439, essv13628444, essv13628501, essv13628468, essv13628512, essv13628438, essv13628418, essv13628697, essv13628681, essv13628605, essv13628434, essv13628637, essv13628712, essv13628509, essv13628725, essv13628472, essv13628716, essv13628603, essv13628430, essv13628433, essv13628570, essv13628488, essv13628642, essv13628659, essv13628606, essv13628499, essv13628559, essv13628616, essv13628550, essv13628566, essv13628608, essv13628623, essv13628690, essv13628585, essv13628581, essv13628679, essv13628621, essv13628695, essv13628614, essv13628579, essv13628548, essv13628676, essv13628572, essv13628565, essv13628601, essv13628428, essv13628700, essv13628626, essv13628641, essv13628619, essv13628507, essv13628666, essv13628650, essv13628496, essv13628710, essv13628473, essv13628647, essv13628425, essv13628598, essv13628426, essv13628602, essv13628524, essv13628677, essv13628727, essv13628675, essv13628625, essv13628427, essv13628719, essv13628549, essv13628544, essv13628607, essv13628431, essv13628577, essv13628432, essv13628569, essv13628447, essv13628720, essv13628693, essv13628671, essv13628469, essv13628573, essv13628589, essv13628635, essv13628620, essv13628545, essv13628495, essv13628547, essv13628505, essv13628649, essv13628578, essv13628656, essv13628593, essv13628465, essv13628546, essv13628542, essv13628551, essv13628687, essv13628462, essv13628604, essv13628436, essv13628575, essv13628489, essv13628536, essv13628708, essv13628482, essv13628456, essv13628568, essv13628653, essv13628518, essv13628466, essv13628484, essv13628440, essv13628726, essv13628596, essv13628494, essv13628645, essv13628515, essv13628588, essv13628567, essv13628655, essv13628703, essv13628448, essv13628528, essv13628571, essv13628485, essv13628715, essv13628492, essv13628561, essv13628628, essv13628560, essv13628709, essv13628704, essv13628519, essv13628523, essv13628639, essv13628453, essv13628540, essv13628554, essv13628707, essv13628538, essv13628632, essv13628479, essv13628564, essv13628480, essv13628633, essv13628442, essv13628520, essv13628451, essv13628491, essv13628631, essv13628530, essv13628618, essv13628586, essv13628458, essv13628553, essv13628417, essv13628613
SamplesHG02658, HG01850, HG01412, HG01402, HG04096, HG01918, HG02072, HG03228, HG00242, HG04222, HG03687, HG03753, HG02784, HG02122, HG03717, HG02661, HG02691, HG02600, HG03018, HG02688, HG02536, HG03999, HG03679, HG03478, HG03782, HG02792, HG03837, HG03645, HG03770, HG03016, HG02690, HG03754, HG02069, HG04206, HG01968, HG03736, HG03663, HG01063, HG04070, HG02733, HG02603, HG01859, HG02252, HG02736, HG03947, HG01973, HG04020, HG01950, HG04047, HG01844, HG02545, HG02780, HG03649, HG01967, HG03784, HG01851, HG01164, HG03697, HG01847, HG03861, HG00282, HG03714, HG02070, HG03718, HG02075, HG02345, HG02142, HG01857, HG03786, HG02057, HG01095, HG02253, HG03711, HG03491, HG01845, HG03771, HG03775, HG02728, HG01077, HG01323, HG03781, HG04235, HG03967, HG03730, HG00690, HG03951, HG02577, HG03713, HG02787, HG01870, HG02121, HG03643, HG04017, HG03953, HG04063, HG03971, HG02783, HG02724, HG02601, HG03752, HG03898, HG04093, HG03694, HG01075, HG04200, HG03653, HG03743, HG03720, HG03238, HG02660, HG01858, HG04025, HG04216, HG02557, HG01980, HG04026, HG03875, HG02010, HG02546, HG01878, HG03949, HG02790, HG03695, HG01874, HG01396, NA21123, HG03869, HG02580, HG03973, HG03779, HG02558, HG03703, HG04080, HG03729, NA20897, HG02700, HG02128, HG03642, HG03977, HG03849, HG03733, HG02079, HG01846, HG03716, HG01600, HG03872, HG02681, HG02774, HG02778, HG03867, HG03864, HG04198, HG04212, HG03773, HG01413, HG03857, HG03652, HG01303, HG03965, HG03731, HG01961, HG03960, HG03237, HG01855, HG04229, HG02648, HG02262, HG01586, HG04202, HG03738, HG04211, HG03015, HG02275, HG01970, HG04002, HG04094, HG01305, HG03668, HG02058, HG03963, HG03772, HG04018, HG01971, HG03895, HG03667, HG03792, HG02734, HG03944, HG03836, HG03950, HG03680, HG04100, HG01953, HG03705, HG03640, HG04022, HG03757, HG03490, HG03976, HG03873, HG02687, HG02549, HG01843, HG01599, HG02655, HG03479, HG01848, HG02786, HG01242, HG03868, HG01893, HG04214, HG03897, HG03986, HG03968, HG02490, HG01170, NA20896, HG03788, HG04106, HG03777, HG01176, HG03693, HG04238, HG03995, HG03744, HG03750, HG03709, HG02737, HG03844, HG03780, HG03785, HG02439, HG01841, HG01187, HG01871, HG03787, HG03644, HG02697, HG03760, HG01162, HG04107, HG02076, HG01088, HG04035, HG04019, NA20126, HG03756, HG02102, HG01852, HG03021, HG02789, HG02555, HG01092, HG01777, HG01311, HG03871, HG03660, HG03858, HG01197, HG02604, HG03974, HG03740, HG03625, HG01921, HG03634, HG02725, HG03991, HG03774, HG01204, HG01992, HG02455, HG03866, HG03833, HG03778, HG02684, HG03790, HG01954, HG02049, HG00742, HG02696, HG02682, HG03838, HG00638, HG03689, NA20785, HG01977, HG03488, HG01974, HG02685, HG04003, HG01991, HG01395, HG04023, HG04015, HG03789, HG01917, HG03863, HG02699, HG03022, HG01089, HG03998, HG03684, HG01872, HG03894, HG03856, HG04056, HG04161, HG01886, HG03698, HG03686, HG01976
Known GenesC9orf78, MIR6855, PRRX2, PTGES, TOR1A, TOR1B, USP20
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3621839
Frequency
Sample Size2504
Observed Gain0
Observed Loss312
Observed Complex0
Frequencyn/a


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