A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3621777



Internal ID6661953
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:127270849..127272516hg38UCSC Ensembl
Innerchr9:127270854..127272512hg38UCSC Ensembl
Outerchr9:127270845..127272521hg38UCSC Ensembl
chr9:130033128..130034795hg19UCSC Ensembl
Innerchr9:130033133..130034791hg19UCSC Ensembl
Outerchr9:130033124..130034800hg19UCSC Ensembl
Cytoband9q33.3
Allele length
AssemblyAllele length
hg381668
hg191668
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13621813, essv13621697, essv13621686, essv13621653, essv13621668, essv13621671, essv13621776, essv13621725, essv13621724, essv13621732, essv13621819, essv13621715, essv13621719, essv13621674, essv13621801, essv13621713, essv13621747, essv13621770, essv13621788, essv13621771, essv13621798, essv13621693, essv13621790, essv13621815, essv13621748, essv13621652, essv13621711, essv13621698, essv13621759, essv13621744, essv13621764, essv13621820, essv13621716, essv13621654, essv13621706, essv13621800, essv13621694, essv13621677, essv13621805, essv13621644, essv13621672, essv13621738, essv13621808, essv13621821, essv13621661, essv13621684, essv13621789, essv13621702, essv13621822, essv13621758, essv13621739, essv13621689, essv13621760, essv13621814, essv13621729, essv13621794, essv13621701, essv13621730, essv13621718, essv13621666, essv13621662, essv13621690, essv13621769, essv13621655, essv13621812, essv13621743, essv13621757, essv13621712, essv13621682, essv13621727, essv13621645, essv13621772, essv13621648, essv13621709, essv13621780, essv13621678, essv13621778, essv13621731, essv13621699, essv13621683, essv13621777, essv13621785, essv13621783, essv13621660, essv13621792, essv13621708, essv13621723, essv13621762, essv13621817, essv13621647, essv13621669, essv13621685, essv13621809, essv13621745, essv13621737, essv13621717, essv13621786, essv13621736, essv13621787, essv13621675, essv13621663, essv13621775, essv13621793, essv13621646, essv13621816, essv13621704, essv13621691, essv13621726, essv13621765, essv13621782, essv13621733, essv13621681, essv13621679, essv13621755, essv13621784, essv13621673, essv13621649, essv13621670, essv13621795, essv13621763, essv13621696, essv13621657, essv13621754, essv13621746, essv13621703, essv13621756, essv13621721, essv13621680, essv13621688, essv13621818, essv13621823, essv13621650, essv13621791, essv13621676, essv13621700, essv13621651, essv13621659, essv13621781, essv13621768, essv13621665, essv13621753, essv13621810, essv13621740, essv13621667, essv13621741, essv13621803, essv13621767, essv13621658, essv13621807, essv13621710, essv13621707, essv13621797, essv13621761, essv13621774, essv13621811, essv13621705, essv13621714, essv13621752, essv13621722, essv13621742, essv13621656, essv13621692, essv13621728, essv13621749, essv13621751, essv13621720, essv13621734, essv13621796, essv13621802, essv13621687, essv13621779, essv13621766, essv13621773, essv13621806, essv13621664, essv13621804, essv13621695, essv13621799, essv13621735, essv13621750
SamplesHG02879, HG02890, NA19137, HG02808, NA19913, HG02107, HG02477, HG02882, HG03567, NA19904, NA18871, HG03084, HG02816, HG01064, HG02799, HG02983, HG03066, HG03196, NA19149, NA20346, HG02255, NA19455, HG01098, HG02006, NA19430, HG01085, HG02974, NA18877, HG01956, HG03469, HG03571, HG02944, NA18865, NA19920, NA20321, NA19184, HG00553, HG03048, HG03458, NA19379, HG01167, NA18507, HG02676, HG01188, HG03103, NA19017, HG01577, HG03538, HG02323, NA19236, HG03109, HG02976, HG03039, HG03572, NA19147, HG03159, NA18868, HG03376, NA19117, NA20320, HG02585, NA19028, HG01107, HG02455, HG03162, HG02053, NA19914, HG03088, HG03470, NA19239, HG02634, NA19323, NA20356, HG02462, HG02646, NA19197, NA19443, HG02568, NA19471, NA19722, HG02577, HG02968, HG03578, HG02772, NA19096, HG02667, HG03241, NA19429, HG03445, HG03520, HG03130, NA18916, HG02595, HG01986, NA19316, HG02757, NA19190, NA19213, HG02840, HG03085, NA19395, NA19172, NA19189, NA20291, HG01308, HG03040, NA19374, NA19703, NA20126, HG01989, NA19206, HG03455, HG03473, HG02461, HG02922, HG03511, HG02594, HG02439, HG02807, NA19901, HG02558, HG03097, HG03514, NA18858, HG03366, HG03518, HG02771, HG03073, HG03433, NA19131, HG02052, HG03297, HG01880, HG02582, HG03352, HG03028, HG03224, HG02281, NA19138, HG02635, HG02923, NA19201, HG02645, NA18915, NA20332, NA19394, HG03246, HG03267, HG03556, NA19431, NA20289, NA20298, HG02628, HG03078, NA19475, HG03123, HG03240, HG02465, NA19327, HG02679, HG01058, NA18499, HG03139, HG02476, HG01108, HG02721, HG03060, HG02445, HG03557, HG01462, HG03515, NA19473, HG03517, HG02332, NA19468, HG02860, NA19385, HG02855, HG02095, HG03082
Known GenesGARNL3
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3621777
Frequency
Sample Size2504
Observed Gain0
Observed Loss180
Observed Complex0
Frequencyn/a


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