A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3621723



Internal ID7008590
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:124568383..124569046hg38UCSC Ensembl
Innerchr9:124568474..124568996hg38UCSC Ensembl
Outerchr9:124568291..124569138hg38UCSC Ensembl
chr9:127330662..127331325hg19UCSC Ensembl
Innerchr9:127330753..127331275hg19UCSC Ensembl
Outerchr9:127330570..127331417hg19UCSC Ensembl
Cytoband9q33.3
Allele length
AssemblyAllele length
hg38664
hg19664
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13618716, essv13618710, essv13618693, essv13618699, essv13618736, essv13618744, essv13618729, essv13618691, essv13618698, essv13618711, essv13618737, essv13618713, essv13618714, essv13618700, essv13618708, essv13618712, essv13618745, essv13618692, essv13618727, essv13618726, essv13618701, essv13618681, essv13618694, essv13618689, essv13618739, essv13618697, essv13618704, essv13618743, essv13618731, essv13618695, essv13618735, essv13618696, essv13618690, essv13618720, essv13618685, essv13618707, essv13618723, essv13618746, essv13618722, essv13618717, essv13618733, essv13618680, essv13618715, essv13618728, essv13618683, essv13618740, essv13618686, essv13618709, essv13618738, essv13618741, essv13618688, essv13618724, essv13618706, essv13618684, essv13618703, essv13618732, essv13618687, essv13618730, essv13618742, essv13618734, essv13618725, essv13618718, essv13618705, essv13618682, essv13618719, essv13618702, essv13618721
SamplesNA18502, NA19700, HG02496, HG02583, HG01462, NA19204, HG02337, HG02318, HG03300, HG02852, NA18917, HG03130, HG03521, HG03280, HG03126, HG03518, NA20346, HG03139, HG02895, HG02541, HG03485, HG02756, NA19130, NA19923, HG02143, HG03556, NA18868, NA19207, HG03195, HG02420, HG03352, HG02502, HG03394, HG03114, NA19200, HG03169, HG02716, HG03132, HG03088, HG02108, NA18516, HG02450, HG02144, HG02953, NA18871, HG03124, HG03202, NA19099, NA19257, NA19225, HG01988, HG03109, HG02807, NA19835, HG03112, HG03157, HG02646, HG03279, HG02938, NA19185, HG02855, HG03376, HG02284, NA18522, HG02643, HG03129, HG03166
Known GenesNR6A1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3621723
Frequency
Sample Size2504
Observed Gain0
Observed Loss67
Observed Complex0
Frequencyn/a


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