A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3621392



Internal ID6661571
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:106977210..106979773hg38UCSC Ensembl
Innerchr9:106977211..106979773hg38UCSC Ensembl
Outerchr9:106977210..106979774hg38UCSC Ensembl
chr9:109739491..109742054hg19UCSC Ensembl
Innerchr9:109739492..109742054hg19UCSC Ensembl
Outerchr9:109739491..109742055hg19UCSC Ensembl
Cytoband9q31.2
Allele length
AssemblyAllele length
hg382564
hg192564
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13594347, essv13594323, essv13594352, essv13594335, essv13594294, essv13594361, essv13594282, essv13594300, essv13594338, essv13594354, essv13594350, essv13594339, essv13594319, essv13594302, essv13594356, essv13594318, essv13594320, essv13594310, essv13594306, essv13594293, essv13594281, essv13594358, essv13594355, essv13594311, essv13594305, essv13594337, essv13594336, essv13594343, essv13594299, essv13594346, essv13594315, essv13594303, essv13594285, essv13594312, essv13594359, essv13594357, essv13594291, essv13594342, essv13594351, essv13594334, essv13594290, essv13594308, essv13594341, essv13594349, essv13594321, essv13594330, essv13594298, essv13594301, essv13594297, essv13594313, essv13594348, essv13594309, essv13594353, essv13594296, essv13594340, essv13594316, essv13594331, essv13594345, essv13594333, essv13594304, essv13594286, essv13594324, essv13594328, essv13594344, essv13594360, essv13594284, essv13594295, essv13594329, essv13594326, essv13594289, essv13594283, essv13594325, essv13594332, essv13594287, essv13594288, essv13594307, essv13594362, essv13594280, essv13594322, essv13594317, essv13594327, essv13594314, essv13594292
SamplesHG03136, HG02580, HG03135, HG02427, NA19030, HG01241, NA19026, HG02621, HG01896, NA19819, NA19404, NA19114, HG03066, NA19023, HG02318, HG03301, NA19334, NA19331, NA19449, HG01883, HG03298, HG03099, HG03294, NA19017, NA19320, HG02323, NA18488, NA19474, HG03376, NA19117, HG03558, NA19028, HG03162, NA19982, NA19390, HG02009, HG02968, HG03442, HG03439, NA19096, NA19351, HG02763, HG03024, HG03166, HG01986, NA19377, HG03085, HG02325, HG03040, NA19374, NA19375, NA19024, NA20348, NA18522, NA19238, NA18510, HG02439, HG02343, NA18504, NA19175, NA19707, HG02571, NA19131, NA19159, HG03291, HG03577, NA19307, NA19318, HG03118, NA19141, HG03132, NA19376, NA19434, HG03081, NA19399, NA18924, NA19130, HG02642, NA19346, HG03372, HG03515, HG02332, NA19466
Known GenesMIR548Q, ZNF462
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3621392
Frequency
Sample Size2504
Observed Gain0
Observed Loss83
Observed Complex0
Frequencyn/a


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