A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3621391



Internal ID6661570
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:106913630..106914284hg38UCSC Ensembl
Innerchr9:106913631..106914284hg38UCSC Ensembl
Outerchr9:106913630..106914285hg38UCSC Ensembl
chr9:109675911..109676565hg19UCSC Ensembl
Innerchr9:109675912..109676565hg19UCSC Ensembl
Outerchr9:109675911..109676566hg19UCSC Ensembl
Cytoband9q31.2
Allele length
AssemblyAllele length
hg38655
hg19655
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13594157, essv13594119, essv13594212, essv13594056, essv13594236, essv13594085, essv13594146, essv13594026, essv13594078, essv13594115, essv13594116, essv13594076, essv13594217, essv13594088, essv13594265, essv13594220, essv13594040, essv13594261, essv13594084, essv13594047, essv13594077, essv13594243, essv13594101, essv13594065, essv13594179, essv13594224, essv13594272, essv13594242, essv13594033, essv13594144, essv13594080, essv13594208, essv13594075, essv13594061, essv13594161, essv13594223, essv13594274, essv13594178, essv13594256, essv13594156, essv13594063, essv13594166, essv13594079, essv13594200, essv13594193, essv13594248, essv13594215, essv13594239, essv13594207, essv13594180, essv13594271, essv13594042, essv13594206, essv13594210, essv13594177, essv13594203, essv13594096, essv13594197, essv13594199, essv13594090, essv13594278, essv13594070, essv13594195, essv13594276, essv13594165, essv13594228, essv13594219, essv13594136, essv13594062, essv13594230, essv13594240, essv13594098, essv13594064, essv13594124, essv13594043, essv13594247, essv13594089, essv13594201, essv13594091, essv13594194, essv13594252, essv13594095, essv13594086, essv13594120, essv13594057, essv13594121, essv13594082, essv13594273, essv13594202, essv13594191, essv13594258, essv13594254, essv13594114, essv13594168, essv13594117, essv13594225, essv13594081, essv13594227, essv13594275, essv13594249, essv13594246, essv13594049, essv13594190, essv13594196, essv13594184, essv13594154, essv13594164, essv13594226, essv13594039, essv13594267, essv13594183, essv13594213, essv13594148, essv13594111, essv13594093, essv13594069, essv13594279, essv13594046, essv13594087, essv13594221, essv13594175, essv13594139, essv13594169, essv13594145, essv13594143, essv13594250, essv13594182, essv13594211, essv13594133, essv13594073, essv13594126, essv13594027, essv13594185, essv13594044, essv13594132, essv13594048, essv13594245, essv13594118, essv13594244, essv13594259, essv13594140, essv13594036, essv13594209, essv13594260, essv13594216, essv13594269, essv13594159, essv13594130, essv13594237, essv13594214, essv13594107, essv13594052, essv13594263, essv13594051, essv13594109, essv13594031, essv13594083, essv13594235, essv13594035, essv13594251, essv13594030, essv13594041, essv13594092, essv13594094, essv13594187, essv13594074, essv13594150, essv13594135, essv13594108, essv13594105, essv13594222, essv13594142, essv13594229, essv13594128, essv13594071, essv13594134, essv13594122, essv13594054, essv13594174, essv13594172, essv13594103, essv13594186, essv13594034, essv13594167, essv13594129, essv13594176, essv13594127, essv13594053, essv13594066, essv13594234, essv13594162, essv13594149, essv13594138, essv13594238, essv13594102, essv13594100, essv13594218, essv13594141, essv13594113, essv13594152, essv13594171, essv13594072, essv13594153, essv13594028, essv13594060, essv13594253, essv13594204, essv13594131, essv13594163, essv13594050, essv13594123, essv13594029, essv13594059, essv13594231, essv13594264, essv13594068, essv13594151, essv13594045, essv13594205, essv13594192, essv13594137, essv13594160, essv13594067, essv13594277, essv13594099, essv13594058, essv13594198, essv13594170, essv13594125, essv13594104, essv13594257, essv13594106, essv13594158, essv13594112, essv13594037, essv13594268, essv13594173, essv13594181, essv13594055, essv13594155, essv13594038, essv13594262, essv13594097, essv13594233, essv13594189, essv13594032, essv13594232, essv13594188, essv13594266, essv13594241, essv13594255, essv13594147, essv13594270, essv13594110
SamplesHG04210, NA19701, HG00650, HG04096, HG00143, NA20891, HG03228, NA20766, NA12286, NA20508, HG01610, HG03717, HG02231, HG00233, HG00244, NA12340, HG03229, HG03018, NA20864, HG00115, HG01518, NA20863, HG02688, NA20771, HG03837, HG00717, HG00641, HG03385, HG03754, HG01702, NA20589, NA20774, HG04042, HG03673, HG03913, HG03736, HG01492, HG03604, NA20768, HG04070, HG01365, HG00311, HG00139, HG03887, HG01080, HG03888, HG01284, HG03947, HG01950, HG04047, HG00118, HG02780, NA19789, HG03861, HG01171, HG03714, HG01122, HG03907, HG04039, HG01857, HG01095, HG04195, HG03928, NA19663, HG03900, HG01498, HG00263, NA12718, NA20519, NA20832, HG03781, HG00551, NA12234, NA20876, HG03967, NA20867, NA21086, HG04017, HG00140, HG03953, HG02601, HG03914, HG04159, NA12778, HG04176, HG01107, HG03694, HG04200, HG03653, NA12043, HG00382, HG03598, HG00155, NA21144, HG03875, HG03708, HG01678, HG04186, HG02790, NA12272, HG03692, HG01396, NA21095, HG01620, HG02558, HG03729, HG01785, HG01086, NA20897, HG03600, HG02694, HG04140, NA21090, NA19779, HG03849, HG00267, HG03716, HG02182, NA20758, HG03925, HG03872, HG02774, HG01479, NA20503, HG01111, HG00171, NA20827, HG03867, HG03955, NA20908, NA21120, HG00096, HG04212, HG03812, HG00114, HG01746, NA11830, HG01098, NA19794, NA20877, HG03965, HG00524, NA19914, HG04229, HG04194, HG04202, HG03738, NA21092, HG00318, HG03668, NA20805, HG04018, HG03895, HG03667, HG00179, HG00879, HG03950, NA20846, HG04100, HG00127, HG03705, HG03757, NA20850, NA20769, HG03905, NA11992, HG03885, HG02655, HG03594, HG03793, NA12761, HG03803, NA19651, HG01398, HG00683, HG02224, HG00236, HG03624, HG04238, HG00182, HG01259, HG03744, HG04029, HG03832, HG03884, HG01524, HG00260, HG03709, HG00133, HG01183, NA20854, HG03844, HG03785, HG01248, HG01841, HG01360, NA20858, NA20787, HG03787, NA12342, HG03760, HG02397, HG04035, HG02102, HG02537, HG01094, HG01161, HG01619, HG03824, NA21141, NA20859, HG03858, NA12249, HG04155, HG04189, HG03854, HG02725, HG02031, HG03755, HG03991, HG01589, HG03940, NA21087, HG03866, HG03778, HG04188, HG01190, HG04239, HG03899, HG00136, HG03689, HG03846, NA20797, HG04090, HG00125, HG01801, HG04023, HG03789, NA21088, NA20868, HG01783, HG03998, HG03684, HG02410, HG00252, HG01617, HG03882, HG03611, HG01775, HG01082, NA21104, HG03686, NA12776, HG03886
Known GenesMIR548Q, ZNF462
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3621391
Frequency
Sample Size2504
Observed Gain0
Observed Loss254
Observed Complex0
Frequencyn/a


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