Variant Details

Variant: esv3621017

Internal ID

7007887

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr9:88923548..88924120	hg38	UCSC Ensembl
Inner	chr9:88923549..88924119	hg38	UCSC Ensembl
Outer	chr9:88923547..88924121	hg38	UCSC Ensembl
	chr9:91538463..91539035	hg19	UCSC Ensembl
Inner	chr9:91538464..91539034	hg19	UCSC Ensembl
Outer	chr9:91538462..91539036	hg19	UCSC Ensembl

Cytoband

9q22.1

Allele length

Assembly	Allele length
hg38	573
hg19	573

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv13549648, essv13549545, essv13549550, essv13549562, essv13549636, essv13549652, essv13549517, essv13549556, essv13549598, essv13549521, essv13549590, essv13549549, essv13549618, essv13549589, essv13549539, essv13549527, essv13549509, essv13549659, essv13549608, essv13549604, essv13549650, essv13549585, essv13549563, essv13549628, essv13549611, essv13549626, essv13549617, essv13549635, essv13549645, essv13549579, essv13549643, essv13549501, essv13549616, essv13549633, essv13549505, essv13549581, essv13549627, essv13549572, essv13549529, essv13549653, essv13549638, essv13549610, essv13549567, essv13549640, essv13549519, essv13549496, essv13549531, essv13549523, essv13549614, essv13549607, essv13549570, essv13549547, essv13549624, essv13549526, essv13549591, essv13549637, essv13549625, essv13549587, essv13549544, essv13549573, essv13549532, essv13549540, essv13549606, essv13549595, essv13549576, essv13549546, essv13549541, essv13549642, essv13549568, essv13549655, essv13549594, essv13549551, essv13549580, essv13549601, essv13549558, essv13549534, essv13549561, essv13549588, essv13549582, essv13549619, essv13549536, essv13549599, essv13549569, essv13549631, essv13549538, essv13549644, essv13549586, essv13549543, essv13549554, essv13549504, essv13549615, essv13549649, essv13549641, essv13549629, essv13549552, essv13549525, essv13549574, essv13549535, essv13549510, essv13549518, essv13549515, essv13549600, essv13549656, essv13549584, essv13549612, essv13549654, essv13549571, essv13549593, essv13549516, essv13549514, essv13549559, essv13549513, essv13549639, essv13549632, essv13549578, essv13549553, essv13549557, essv13549498, essv13549647, essv13549499, essv13549609, essv13549507, essv13549511, essv13549502, essv13549620, essv13549621, essv13549530, essv13549533, essv13549605, essv13549548, essv13549500, essv13549566, essv13549537, essv13549555, essv13549528, essv13549603, essv13549577, essv13549623, essv13549564, essv13549634, essv13549512, essv13549602, essv13549613, essv13549596, essv13549524, essv13549622, essv13549575, essv13549565, essv13549658, essv13549522, essv13549592, essv13549520, essv13549542, essv13549597, essv13549503, essv13549508, essv13549657, essv13549506, essv13549630, essv13549560, essv13549651, essv13549646, essv13549497, essv13549583

Samples

NA18502, HG03096, HG02339, HG02890, HG03484, HG03378, NA19909, NA18508, HG01885, HG03175, HG03241, HG02419, NA19020, NA18917, HG03115, NA19092, NA19819, HG03190, NA18878, HG03297, NA20346, HG03577, HG02589, NA19098, NA18870, NA20356, HG03478, HG03572, HG03074, NA19374, HG03133, NA19171, NA18519, HG03135, NA20320, HG01168, HG03370, HG02549, NA19131, HG03342, HG03105, NA19023, HG03578, NA20287, HG02111, NA19130, HG02505, NA19923, HG02143, NA18874, NA18868, HG03212, NA19238, HG02885, NA19207, NA19172, HG02588, NA19159, HG03352, NA19026, HG02502, NA18520, HG02427, HG02882, HG02477, NA18867, NA19200, NA19027, HG03048, HG00743, HG02009, HG01183, HG01139, HG02820, HG03160, NA19707, NA18934, HG02334, NA19152, NA19984, HG03547, HG03291, HG02322, NA18516, NA18915, HG03081, HG02878, HG03124, HG03311, NA19118, HG02817, NA18499, NA18912, HG02884, HG02881, HG03451, NA19225, NA18523, HG03354, HG02332, NA19095, NA18858, HG03109, HG02568, HG02484, HG01896, HG02722, NA19035, HG03064, HG02255, HG02330, NA19390, NA18909, HG03240, HG03461, HG03437, HG02799, HG02759, HG03367, HG02546, HG01894, HG03458, NA19144, HG02314, NA19835, HG03127, NA19310, HG03473, HG02317, HG01108, HG03419, HG03084, NA20357, NA19818, HG03565, HG03112, HG02974, HG02095, HG03157, HG02938, NA19713, HG02768, HG02676, NA19102, HG02013, NA19096, NA19711, HG03077, HG03470, HG02051, HG01883, NA19030, NA19430, HG02861, HG02805, NA18511, NA18522, HG02643, HG03129, NA19429, NA19214, NA19153, HG03265, HG02760

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3621017

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	164
Observed Complex	0
Frequency	n/a