Variant Details

Variant: esv3620720

Internal ID

7007590

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr9:75389296..75396886	hg38	UCSC Ensembl
Inner	chr9:75389296..75396886	hg38	UCSC Ensembl
Outer	chr9:75388997..75397308	hg38	UCSC Ensembl
	chr9:78004212..78011802	hg19	UCSC Ensembl
Inner	chr9:78004212..78011802	hg19	UCSC Ensembl
Outer	chr9:78003913..78012224	hg19	UCSC Ensembl

Cytoband

9q21.13

Allele length

Assembly	Allele length
hg38	7591
hg19	7591

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv13526799, essv13526701, essv13526748, essv13526674, essv13526733, essv13526788, essv13526831, essv13526820, essv13526765, essv13526668, essv13526719, essv13526720, essv13526821, essv13526753, essv13526673, essv13526806, essv13526728, essv13526771, essv13526731, essv13526713, essv13526804, essv13526830, essv13526762, essv13526811, essv13526736, essv13526660, essv13526696, essv13526810, essv13526671, essv13526716, essv13526687, essv13526790, essv13526777, essv13526768, essv13526750, essv13526717, essv13526665, essv13526690, essv13526667, essv13526710, essv13526785, essv13526689, essv13526684, essv13526723, essv13526692, essv13526688, essv13526726, essv13526776, essv13526709, essv13526814, essv13526801, essv13526712, essv13526816, essv13526672, essv13526772, essv13526745, essv13526697, essv13526724, essv13526808, essv13526807, essv13526815, essv13526826, essv13526763, essv13526670, essv13526658, essv13526678, essv13526734, essv13526779, essv13526706, essv13526789, essv13526818, essv13526773, essv13526662, essv13526694, essv13526682, essv13526766, essv13526702, essv13526822, essv13526677, essv13526767, essv13526793, essv13526756, essv13526749, essv13526809, essv13526761, essv13526727, essv13526800, essv13526703, essv13526754, essv13526698, essv13526740, essv13526715, essv13526659, essv13526751, essv13526758, essv13526817, essv13526730, essv13526683, essv13526833, essv13526679, essv13526681, essv13526699, essv13526823, essv13526774, essv13526755, essv13526775, essv13526786, essv13526791, essv13526813, essv13526752, essv13526708, essv13526784, essv13526664, essv13526802, essv13526819, essv13526729, essv13526675, essv13526764, essv13526693, essv13526746, essv13526824, essv13526825, essv13526744, essv13526794, essv13526759, essv13526685, essv13526714, essv13526796, essv13526742, essv13526707, essv13526721, essv13526782, essv13526787, essv13526738, essv13526711, essv13526803, essv13526732, essv13526781, essv13526691, essv13526686, essv13526725, essv13526834, essv13526747, essv13526704, essv13526757, essv13526769, essv13526827, essv13526661, essv13526718, essv13526797, essv13526829, essv13526792, essv13526770, essv13526778, essv13526737, essv13526798, essv13526705, essv13526739, essv13526695, essv13526680, essv13526832, essv13526676, essv13526741, essv13526828, essv13526700, essv13526795, essv13526780, essv13526722, essv13526783, essv13526812, essv13526805, essv13526743, essv13526666, essv13526735, essv13526669, essv13526760, essv13526663

Samples

NA12383, NA12842, NA21111, HG00102, HG03965, NA11995, NA12814, HG01773, HG00351, NA19914, HG00100, NA20514, NA20274, HG01326, NA20531, HG01389, HG00151, HG00233, NA20532, NA12045, HG02691, HG01686, HG00364, NA20805, NA12340, HG03018, NA20864, NA12058, HG02215, HG03792, HG01518, HG00261, HG03009, HG04059, HG01500, HG01503, HG01070, HG00272, NA20890, HG01177, HG00173, NA20756, HG03873, NA20795, NA11992, NA20768, HG01083, HG01393, HG01242, HG03619, HG00277, NA12275, HG03897, HG01067, HG00379, NA20775, NA12156, HG00236, HG03595, HG00262, NA12044, NA12889, NA12815, HG01440, HG01259, NA20412, HG02427, HG01048, HG01771, HG00326, HG01550, HG00253, HG01312, HG01256, HG00290, NA20904, HG03780, NA12760, NA20800, HG00268, HG01435, HG00282, HG02233, NA19670, HG01670, HG00145, HG00245, NA12342, HG01104, NA12003, NA12872, HG01271, HG00101, HG02144, NA19788, HG01119, HG01615, HG01094, HG00284, HG01073, NA20867, HG01414, HG00250, NA21086, NA20581, NA21112, NA06989, HG01705, HG01334, NA19761, HG03914, NA06985, HG01403, HG01286, NA12778, HG04176, HG02219, HG00246, HG01700, HG03653, NA12043, NA20296, HG00258, NA21113, HG00382, HG03598, NA20801, NA12716, HG01678, HG02220, HG00375, HG01685, HG00136, HG00638, HG01272, NA12873, HG01357, NA20790, HG00237, NA19679, HG03870, NA07037, NA21094, NA06986, HG03681, HG00339, HG00269, NA21125, HG01086, HG01577, HG02694, NA19785, NA20847, HG03977, NA20849, HG00342, HG00288, HG03998, HG00310, HG01468, NA20528, HG01105, HG01479, HG00372, HG02778, HG00171, HG00345, HG01566, HG01509, HG01776, HG01583, HG00362, NA11832, NA20772, HG03989, HG01747, HG01608

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3620720

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	177
Observed Complex	0
Frequency	n/a