A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3620396



Internal ID7007267
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:36474160..36475002hg38UCSC Ensembl
Innerchr9:36474203..36474960hg38UCSC Ensembl
Outerchr9:36474118..36475045hg38UCSC Ensembl
chr9:36474157..36474999hg19UCSC Ensembl
Innerchr9:36474200..36474957hg19UCSC Ensembl
Outerchr9:36474115..36475042hg19UCSC Ensembl
Cytoband9p13.2
Allele length
AssemblyAllele length
hg38843
hg19843
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13462240, essv13462429, essv13462547, essv13462229, essv13462764, essv13462136, essv13462250, essv13462591, essv13462201, essv13462391, essv13462600, essv13462830, essv13462205, essv13462496, essv13462823, essv13462656, essv13462139, essv13462801, essv13462436, essv13462187, essv13462245, essv13462819, essv13462610, essv13462164, essv13462422, essv13462415, essv13462171, essv13462388, essv13462468, essv13462636, essv13462157, essv13462281, essv13462202, essv13462321, essv13462521, essv13462607, essv13462404, essv13462263, essv13462579, essv13462482, essv13462790, essv13462516, essv13462627, essv13462605, essv13462560, essv13462375, essv13462483, essv13462470, essv13462239, essv13462146, essv13462546, essv13462414, essv13462834, essv13462683, essv13462441, essv13462445, essv13462638, essv13462559, essv13462143, essv13462593, essv13462134, essv13462723, essv13462207, essv13462781, essv13462672, essv13462465, essv13462392, essv13462369, essv13462767, essv13462137, essv13462299, essv13462677, essv13462301, essv13462380, essv13462506, essv13462421, essv13462835, essv13462755, essv13462603, essv13462721, essv13462309, essv13462497, essv13462215, essv13462228, essv13462637, essv13462243, essv13462654, essv13462168, essv13462420, essv13462715, essv13462700, essv13462625, essv13462737, essv13462630, essv13462354, essv13462350, essv13462434, essv13462222, essv13462200, essv13462324, essv13462759, essv13462444, essv13462526, essv13462223, essv13462242, essv13462757, essv13462554, essv13462479, essv13462280, essv13462576, essv13462796, essv13462448, essv13462253, essv13462387, essv13462709, essv13462571, essv13462413, essv13462713, essv13462210, essv13462211, essv13462282, essv13462669, essv13462430, essv13462160, essv13462800, essv13462220, essv13462811, essv13462631, essv13462190, essv13462826, essv13462197, essv13462347, essv13462577, essv13462682, essv13462614, essv13462485, essv13462643, essv13462651, essv13462191, essv13462776, essv13462722, essv13462386, essv13462760, essv13462193, essv13462595, essv13462389, essv13462179, essv13462697, essv13462601, essv13462673, essv13462621, essv13462707, essv13462814, essv13462791, essv13462277, essv13462400, essv13462266, essv13462178, essv13462681, essv13462478, essv13462613, essv13462684, essv13462611, essv13462756, essv13462370, essv13462639, essv13462704, essv13462461, essv13462553, essv13462807, essv13462221, essv13462552, essv13462500, essv13462568, essv13462730, essv13462652, essv13462777, essv13462257, essv13462619, essv13462510, essv13462634, essv13462592, essv13462741, essv13462647, essv13462417, essv13462802, essv13462269, essv13462839, essv13462467, essv13462567, essv13462251, essv13462702, essv13462189, essv13462131, essv13462666, essv13462305, essv13462130, essv13462431, essv13462449, essv13462551, essv13462161, essv13462821, essv13462401, essv13462459, essv13462716, essv13462747, essv13462285, essv13462291, essv13462742, essv13462761, essv13462314, essv13462766, essv13462779, essv13462244, essv13462213, essv13462541, essv13462141, essv13462271, essv13462641, essv13462319, essv13462696, essv13462671, essv13462537, essv13462774, essv13462353, essv13462310, essv13462306, essv13462535, essv13462289, essv13462703, essv13462425, essv13462180, essv13462726, essv13462275, essv13462418, essv13462326, essv13462635, essv13462341, essv13462735, essv13462648, essv13462501, essv13462492, essv13462416, essv13462829, essv13462165, essv13462295, essv13462633, essv13462574, essv13462298, essv13462286, essv13462231, essv13462504, essv13462734, essv13462731, essv13462528, essv13462555, essv13462586, essv13462147, essv13462809, essv13462292, essv13462773, essv13462578, essv13462265, essv13462351, essv13462457, essv13462545, essv13462438, essv13462533, essv13462832, essv13462650, essv13462670, essv13462738, essv13462372, essv13462689, essv13462330, essv13462352, essv13462252, essv13462606, essv13462195, essv13462718, essv13462486, essv13462396, essv13462377, essv13462503, essv13462158, essv13462462, essv13462450, essv13462484, essv13462296, essv13462373, essv13462198, essv13462795, essv13462378, essv13462623, essv13462156, essv13462712, essv13462646, essv13462740, essv13462367, essv13462356, essv13462529, essv13462397, essv13462224, essv13462685, essv13462474, essv13462701, essv13462209, essv13462339, essv13462267, essv13462260, essv13462509, essv13462343, essv13462313, essv13462399, essv13462476, essv13462132, essv13462618, essv13462615, essv13462822, essv13462475, essv13462270, essv13462698, essv13462724, essv13462453, essv13462519, essv13462442, essv13462538, essv13462520, essv13462278, essv13462708, essv13462775, essv13462561, essv13462177, essv13462505, essv13462563, essv13462376, essv13462167, essv13462653, essv13462564, essv13462797, essv13462276, essv13462803, essv13462402, essv13462176, essv13462447, essv13462544, essv13462452, essv13462570, essv13462446, essv13462594, essv13462473, essv13462426, essv13462661, essv13462499, essv13462412, essv13462262, essv13462175, essv13462494, essv13462455, essv13462234, essv13462691, essv13462550, essv13462556, essv13462322, essv13462728, essv13462604, essv13462534, essv13462808, essv13462129, essv13462368, essv13462337, essv13462831, essv13462562, essv13462145, essv13462273, essv13462584, essv13462748, essv13462628, essv13462765, essv13462317, essv13462274, essv13462294, essv13462382, essv13462133, essv13462743, essv13462365, essv13462293, essv13462463, essv13462183, essv13462714, essv13462668, essv13462542, essv13462674, essv13462514, essv13462664, essv13462667, essv13462233, essv13462225, essv13462752, essv13462206, essv13462768, essv13462536, essv13462320, essv13462717, essv13462214, essv13462488, essv13462363, essv13462675, essv13462170, essv13462287, essv13462493, essv13462395, essv13462329, essv13462820, essv13462359, essv13462394, essv13462437, essv13462806, essv13462508, essv13462398, essv13462204, essv13462331, essv13462763, essv13462440, essv13462729, essv13462481, essv13462316, essv13462687, essv13462815, essv13462582, essv13462247, essv13462334, essv13462428, essv13462355, essv13462836, essv13462749, essv13462662, essv13462522, essv13462694, essv13462518, essv13462424, essv13462772, essv13462788, essv13462342, essv13462838, essv13462769, essv13462511, essv13462345, essv13462649, essv13462408, essv13462784, essv13462599, essv13462410, essv13462150, essv13462307, essv13462549, essv13462336, essv13462159, essv13462596, essv13462419, essv13462173, essv13462794, essv13462585, essv13462590, essv13462318, essv13462226, essv13462128, essv13462199, essv13462589, essv13462216, essv13462362, essv13462557, essv13462626, essv13462217, essv13462573, essv13462745, essv13462154, essv13462315, essv13462182, essv13462512, essv13462349, essv13462799, essv13462495, essv13462837, essv13462785, essv13462543, essv13462335, essv13462371, essv13462693, essv13462142, essv13462816, essv13462620, essv13462385, essv13462155, essv13462754, essv13462753, essv13462344, essv13462458, essv13462232, essv13462507, essv13462241, essv13462364, essv13462290, essv13462311, essv13462632, essv13462663, essv13462327, essv13462517, essv13462575, essv13462805, essv13462403, essv13462804, essv13462531, essv13462152, essv13462558, essv13462248, essv13462218, essv13462230, essv13462246, essv13462525, essv13462655, essv13462524, essv13462644, essv13462346, essv13462477, essv13462435, essv13462597, essv13462640, essv13462523, essv13462744, essv13462261, essv13462612, essv13462439, essv13462622, essv13462312, essv13462569, essv13462151, essv13462456, essv13462732, essv13462236, essv13462736, essv13462184, essv13462135, essv13462602, essv13462284, essv13462219, essv13462423, essv13462798, essv13462793, essv13462609, essv13462491, essv13462480, essv13462406, essv13462679, essv13462770, essv13462695, essv13462308, essv13462466, essv13462153, essv13462427, essv13462304, essv13462658, essv13462443, essv13462527, essv13462283, essv13462789, essv13462812, essv13462657, essv13462692, essv13462411, essv13462472, essv13462366, essv13462303, essv13462750, essv13462432, essv13462827, essv13462751, essv13462254, essv13462148, essv13462194, essv13462688, essv13462817, essv13462587, essv13462374, essv13462235, essv13462288, essv13462792, essv13462172, essv13462678, essv13462598, essv13462532, essv13462588, essv13462390, essv13462384, essv13462548, essv13462469, essv13462454, essv13462733, essv13462379, essv13462583, essv13462566, essv13462539, essv13462464, essv13462264, essv13462238, essv13462279, essv13462616, essv13462166, essv13462333, essv13462719, essv13462188, essv13462686, essv13462433, essv13462810, essv13462360, essv13462739, essv13462487, essv13462825, essv13462778, essv13462490, essv13462272, essv13462297, essv13462727, essv13462660, essv13462580, essv13462144, essv13462268, essv13462340, essv13462259, essv13462451, essv13462258, essv13462565, essv13462325, essv13462690, essv13462255, essv13462185, essv13462645, essv13462710, essv13462706, essv13462530, essv13462498, essv13462192, essv13462300, essv13462676, essv13462407, essv13462328, essv13462705, essv13462381, essv13462169, essv13462256, essv13462746, essv13462138, essv13462711, essv13462181, essv13462332, essv13462572, essv13462624, essv13462608, essv13462383, essv13462203, essv13462405, essv13462617, essv13462720, essv13462358, essv13462818, essv13462323, essv13462149, essv13462196, essv13462787, essv13462471, essv13462515, essv13462174, essv13462780, essv13462227, essv13462680, essv13462460, essv13462833, essv13462629, essv13462361, essv13462163, essv13462659, essv13462786, essv13462665, essv13462140, essv13462771, essv13462357, essv13462699, essv13462186, essv13462513, essv13462489, essv13462783, essv13462782, essv13462393, essv13462502, essv13462237, essv13462762, essv13462409, essv13462302, essv13462208, essv13462828, essv13462338, essv13462642, essv13462758, essv13462581, essv13462813, essv13462162, essv13462725, essv13462540, essv13462348, essv13462249, essv13462824, essv13462212
SamplesHG01485, NA20339, HG01850, HG00442, NA21111, NA20891, HG00608, HG03228, NA18947, HG01885, HG01031, HG04060, NA21099, HG03175, NA12843, HG02661, HG03449, NA18999, HG00729, NA12751, HG02600, HG03616, HG03455, HG02017, HG02050, NA18504, NA18530, HG02356, HG03372, HG01704, NA18633, HG03679, NA20359, NA20894, HG00337, HG00717, HG01873, HG00138, NA19379, HG02069, NA20589, HG02156, HG04206, HG02840, HG02756, HG02521, NA18993, HG00129, HG03736, HG01492, NA18618, NA18916, NA18574, HG03874, HG02645, HG01528, HG01083, HG03978, HG03040, NA19384, HG01859, HG04033, HG00139, HG00130, NA19720, HG03910, HG00632, NA20775, NA18868, HG02389, HG03045, HG02082, NA20412, HG04047, NA18985, HG03585, HG02409, HG01967, NA20904, HG03697, NA18538, HG01867, NA19070, HG03907, HG02142, HG01857, NA19175, NA20521, HG00657, HG03928, NA19043, HG02731, HG01845, HG00344, NA19081, HG02728, NA18948, HG04177, HG03781, HG02878, HG00692, NA18548, HG03823, NA18907, HG03301, NA20901, HG04173, HG02121, HG01613, NA19750, HG02141, HG03024, NA19059, HG02601, NA19009, HG02256, HG03006, HG03752, HG02332, NA18531, HG04093, HG02127, HG01107, HG01811, HG01257, NA20851, NA18533, HG01597, NA18517, NA21144, HG04026, NA18564, HG02308, HG02088, NA18628, HG03949, HG02355, NA20870, HG03920, HG03458, HG03117, HG01874, NA19331, HG02391, HG03702, HG02232, HG01866, NA18943, HG02137, NA18615, HG02188, HG02133, HG01861, NA19328, HG00614, HG02379, HG02128, HG00513, NA19785, HG02401, HG02079, HG03279, HG01799, NA18609, HG03716, NA19102, HG04098, HG00112, HG02013, HG02291, HG02182, HG04171, HG01794, NA18989, HG02851, NA20827, HG03867, NA19065, HG03985, HG02643, HG01509, HG02406, NA18577, HG03265, HG00593, NA20762, HG03690, HG00626, HG00096, HG02614, HG01746, HG01441, NA19700, HG03652, NA19397, HG01052, HG02702, NA18980, HG04194, HG02262, HG02035, HG01586, NA18561, NA18881, NA19734, NA18599, HG03015, NA18641, HG02061, NA18877, NA18603, HG02360, HG01305, HG02476, HG02277, HG02058, HG04018, HG04164, HG00150, NA19669, HG03577, NA19190, HG03950, HG01500, HG01250, HG02151, HG03640, HG03757, HG02407, HG02087, HG00689, HG02541, HG02325, NA19723, NA18635, HG03937, NA20900, HG03765, HG00458, HG01843, HG01599, HG00634, NA19131, NA18942, HG01816, HG00610, NA19197, HG02655, NA19023, NA19054, HG03629, HG04131, HG01848, NA20541, HG00120, HG02395, HG00683, HG03986, HG02490, HG00262, NA20340, NA18560, HG04106, HG01767, HG01046, NA19075, NA18617, HG01892, NA19087, HG03995, NA19002, HG02138, NA18520, HG03055, HG03583, NA18908, HG02882, HG00419, NA18638, HG00675, HG00464, HG00108, NA20818, NA19007, HG03709, HG00543, HG02570, HG00629, HG02136, HG04062, HG00428, NA19347, HG01790, NA18644, NA20536, HG02076, HG00475, HG02307, HG00500, NA21118, NA18910, HG04180, HG01852, HG03563, HG03824, HG00844, HG03858, HG03397, HG02048, NA19031, HG01383, NA20881, HG03625, HG01921, HG03571, HG01842, HG02081, HG02725, HG03991, NA21142, HG02408, HG02399, HG01589, NA18646, NA19401, HG00476, HG03866, HG04134, NA19834, NA18543, HG03461, NA18559, HG00742, HG00565, HG04239, NA18950, HG02064, NA19732, HG01800, HG03689, HG01598, HG00631, NA18591, HG00256, HG02814, HG04003, HG02181, NA19759, NA19323, HG03432, HG00446, HG02238, NA19472, HG01028, HG03025, NA18987, NA12749, HG02032, HG03998, HG00343, NA18552, HG03538, HG00372, HG03445, NA18984, HG00472, HG01863, HG03890, HG00437, NA19153, NA20511, HG04210, NA19701, HG01412, NA19703, HG02072, HG02385, HG00242, HG00358, HG02026, HG02784, HG00766, NA20878, HG02029, HG02727, HG02078, NA18639, HG01806, HG03298, NA12340, HG01947, HG00449, HG00654, HG01051, HG00261, NA18602, HG04156, NA18988, NA18627, HG03009, HG00663, NA18519, HG04038, HG03016, NA18597, HG01351, HG00674, HG02383, HG01168, HG04042, HG02085, NA19062, HG04182, HG02301, NA07347, NA21108, HG02733, HG01840, HG00451, HG02816, HG03887, HG03619, HG00867, NA20278, HG02187, NA19372, HG03888, HG03691, HG00705, NA18966, HG02190, NA18990, HG01844, HG01048, HG01058, HG01121, HG03394, HG00253, NA18539, HG03784, NA20318, NA19027, HG01124, HG02047, HG03343, HG00154, HG00443, NA19091, HG03363, HG01171, NA18525, HG02075, HG00557, HG00245, HG02057, HG03457, HG02775, HG01142, HG00583, NA18579, HG02522, HG03805, NA18534, HG03967, NA11919, HG02577, HG00531, HG01870, HG00684, HG02259, HG01593, HG01101, HG03953, HG03969, NA18555, HG03046, NA18963, HG00704, HG03898, HG00864, NA18570, NA18858, NA18541, NA19012, NA18953, HG03238, HG00407, NA19003, HG02330, HG01812, NA19072, HG04186, HG01685, HG00734, NA19090, HG01396, NA20527, NA20362, NA19835, HG02982, HG00473, HG03469, HG04099, NA19324, HG01137, NA19783, HG04080, NA18501, HG02095, HG04140, HG03642, HG01868, NA19468, NA19474, NA20852, HG03063, NA18636, HG01600, HG03925, HG01468, HG02681, NA19900, NA18983, HG01807, NA19430, NA18957, NA19312, HG02778, HG02020, NA18623, HG04153, HG04061, NA18740, HG01927, HG01805, HG01786, NA21091, NA18997, HG00403, HG00881, HG03773, NA19222, HG02250, HG00536, NA21089, HG01438, HG00524, HG01860, HG01855, HG03767, HG03738, HG04211, HG02337, NA20532, NA18917, HG00367, HG02870, HG00103, NA19777, HG03100, HG00566, HG01971, HG02271, HG01632, HG00879, HG02023, HG03680, NA18967, NA19374, HG03082, HG04100, HG03464, NA20796, NA19005, HG02153, HG01366, HG03135, NA19762, HG01853, HG03490, HG02491, HG01488, HG02155, HG03873, NA20317, NA18619, NA20905, NA18642, NA12283, NA19771, NA19088, NA19138, HG02505, HG02281, NA19404, HG04214, NA18970, HG03189, HG03268, HG02512, NA18977, HG03595, NA19917, NA19731, NA19385, HG03696, HG00422, NA18986, HG03693, HG04238, NA20845, NA20811, HG04185, HG02073, HG02180, NA18640, HG03114, NA18614, HG02009, HG01353, HG03844, HG02977, HG02439, HG02265, HG03054, HG02233, HG01871, HG02513, HG02025, HG01104, HG01271, HG00653, HG02397, HG00701, HG01088, NA19236, HG02322, HG02390, HG01989, HG00598, NA18637, NA20767, NA18630, HG00619, HG02757, HG00708, NA18566, NA20299, HG03382, HG00956, HG03660, NA20538, HG03974, HG02086, HG00613, HG00525, NA19320, HG02292, NA19338, HG02184, HG02031, HG03755, NA19095, NA18634, NA18945, NA19436, NA18546, NA18608, HG02813, NA20821, NA21113, NA18542, HG03833, HG03809, NA18961, HG02799, HG02049, NA19473, HG03899, NA20804, HG00623, NA19334, HG02839, NA18643, HG04090, HG01862, HG00269, HG00107, NA20357, HG01395, HG02974, HG02970, NA19060, HG00656, HG03022, HG02113, HG03615, HG02239, HG01817, NA19096, HG01105, HG02028, HG01378, NA19755, NA19758, HG02425, HG01566, HG03698, HG00978, HG02060, NA18965, HG03886
Known Genes
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3620396
Frequency
Sample Size2504
Observed Gain0
Observed Loss712
Observed Complex0
Frequencyn/a


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