A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3619842



Internal ID6660028
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:17401393..17406960hg38UCSC Ensembl
Innerchr9:17401422..17406931hg38UCSC Ensembl
Outerchr9:17401364..17406989hg38UCSC Ensembl
chr9:17401391..17406958hg19UCSC Ensembl
Innerchr9:17401420..17406929hg19UCSC Ensembl
Outerchr9:17401362..17406987hg19UCSC Ensembl
Cytoband9p22.2
Allele length
AssemblyAllele length
hg385568
hg195568
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv13412157, essv13412156, essv13412163, essv13412166, essv13412170, essv13412135, essv13412126, essv13412131, essv13412180, essv13412148, essv13412124, essv13412162, essv13412127, essv13412172, essv13412155, essv13412164, essv13412137, essv13412152, essv13412160, essv13412123, essv13412182, essv13412143, essv13412136, essv13412140, essv13412176, essv13412171, essv13412138, essv13412144, essv13412153, essv13412159, essv13412169, essv13412145, essv13412141, essv13412132, essv13412133, essv13412129, essv13412158, essv13412165, essv13412178, essv13412128, essv13412175, essv13412147, essv13412179, essv13412168, essv13412142, essv13412134, essv13412167, essv13412151, essv13412177, essv13412149, essv13412161, essv13412139, essv13412181, essv13412150, essv13412174, essv13412154, essv13412173, essv13412183, essv13412130, essv13412146, essv13412125
SamplesHG02715, HG02854, HG00734, HG03567, HG03279, HG01444, HG02799, HG03196, HG02255, HG03086, HG03301, NA19430, NA19317, HG03419, NA19451, HG03469, HG03212, HG02946, HG03311, NA19338, NA19144, HG03099, HG01990, HG02583, HG02982, HG01107, HG02588, NA20356, HG02568, HG02577, HG01395, HG03241, NA19440, HG02851, NA18916, NA19316, NA19324, NA19247, NA19395, NA19393, NA20126, HG03473, NA18923, NA18510, HG02623, NA18858, HG03518, HG03073, HG02881, NA19235, NA18907, HG02635, NA19201, NA19446, HG03240, HG01464, NA19346, HG03271, HG02620, HG00136, HG02610
Known GenesCNTLN
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3619842
Frequency
Sample Size2504
Observed Gain0
Observed Loss61
Observed Complex0
Frequencyn/a


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