Variant Details

Variant: esv3614685

Internal ID

6654890

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr7:115943420..115947878	hg38	UCSC Ensembl
Inner	chr7:115943920..115947378	hg38	UCSC Ensembl
Outer	chr7:115942420..115948878	hg38	UCSC Ensembl
	chr7:115583474..115587932	hg19	UCSC Ensembl
Inner	chr7:115583974..115587432	hg19	UCSC Ensembl
Outer	chr7:115582474..115588932	hg19	UCSC Ensembl

Cytoband

7q31.2

Allele length

Assembly	Allele length
hg38	4459
hg19	4459

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12933666, essv12933761, essv12933734, essv12933673, essv12933742, essv12933705, essv12933663, essv12933743, essv12933707, essv12933703, essv12933745, essv12933776, essv12933732, essv12933755, essv12933653, essv12933720, essv12933675, essv12933702, essv12933762, essv12933765, essv12933710, essv12933780, essv12933779, essv12933714, essv12933730, essv12933726, essv12933724, essv12933654, essv12933760, essv12933716, essv12933717, essv12933686, essv12933778, essv12933678, essv12933773, essv12933753, essv12933667, essv12933771, essv12933766, essv12933698, essv12933737, essv12933775, essv12933668, essv12933689, essv12933693, essv12933704, essv12933763, essv12933671, essv12933692, essv12933713, essv12933687, essv12933725, essv12933747, essv12933733, essv12933748, essv12933661, essv12933740, essv12933711, essv12933683, essv12933712, essv12933729, essv12933658, essv12933655, essv12933731, essv12933664, essv12933727, essv12933695, essv12933718, essv12933723, essv12933769, essv12933690, essv12933665, essv12933685, essv12933751, essv12933758, essv12933752, essv12933770, essv12933674, essv12933756, essv12933696, essv12933722, essv12933772, essv12933774, essv12933777, essv12933680, essv12933728, essv12933736, essv12933719, essv12933657, essv12933676, essv12933739, essv12933744, essv12933697, essv12933694, essv12933652, essv12933768, essv12933715, essv12933721, essv12933746, essv12933656, essv12933738, essv12933709, essv12933700, essv12933735, essv12933767, essv12933708, essv12933679, essv12933749, essv12933672, essv12933659, essv12933681, essv12933706, essv12933701, essv12933764, essv12933741, essv12933684, essv12933699, essv12933662, essv12933750, essv12933682, essv12933688, essv12933660, essv12933677, essv12933670, essv12933754, essv12933759, essv12933669, essv12933691, essv12933757

Samples

NA20882, HG00650, NA18621, HG03965, NA20508, HG04222, HG03753, HG02035, HG04202, HG02122, HG04211, HG03607, HG03015, HG04076, HG04002, HG04094, NA18545, NA18625, HG02384, HG03944, HG04059, HG03235, HG03645, HG02153, HG03706, NA18597, HG03943, HG03757, HG03808, HG04206, HG04042, HG03604, HG00610, HG03874, HG02655, NA18642, NA18582, HG03234, HG03911, HG01840, HG02131, NA21109, HG04106, HG03624, HG03777, HG04238, HG03995, HG03814, HG04185, HG03744, HG03784, HG03862, NA18951, HG03902, HG04225, HG02142, NA21119, HG03990, NA20885, HG02731, HG01845, HG03900, HG03945, HG03775, HG03805, HG02165, NA18572, HG01808, HG04177, HG03781, NA20903, NA20901, HG03824, HG04054, NA20859, NA11893, HG03713, HG03802, HG01791, HG01593, HG04017, HG00525, HG03634, HG03969, HG03006, HG03752, HG03755, HG03774, HG02399, NA19012, HG03743, HG03720, HG03848, HG02684, NA21144, HG02223, HG04186, HG02790, HG03689, HG02651, HG03488, HG00662, NA20887, HG03703, NA20888, HG02371, HG03729, NA20906, HG03600, HG02700, HG00478, HG04015, HG03642, HG01868, NA18636, HG02113, HG04098, HG00131, HG02182, HG01872, HG03872, HG00728, HG03611, HG04056, HG03931, HG03815, HG01097, NA20908, HG03741

Known Genes

TFEC

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3614685

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	129
Observed Complex	0
Frequency	n/a