Variant Details

Variant: esv3614048

Internal ID

6654255

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr7:88235075..88240514	hg38	UCSC Ensembl
Inner	chr7:88235075..88240514	hg38	UCSC Ensembl
Outer	chr7:88234707..88240875	hg38	UCSC Ensembl
	chr7:87864390..87869829	hg19	UCSC Ensembl
Inner	chr7:87864390..87869829	hg19	UCSC Ensembl
Outer	chr7:87864022..87870190	hg19	UCSC Ensembl

Cytoband

7q21.12

Allele length

Assembly	Allele length
hg38	5440
hg19	5440

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12879988, essv12879917, essv12879886, essv12879896, essv12879978, essv12879887, essv12879930, essv12879922, essv12879884, essv12879932, essv12879964, essv12879948, essv12879915, essv12879954, essv12879916, essv12879951, essv12879981, essv12879955, essv12879960, essv12879969, essv12879942, essv12879894, essv12879949, essv12879947, essv12879961, essv12879944, essv12879934, essv12879902, essv12879888, essv12879963, essv12879928, essv12879974, essv12879945, essv12879946, essv12879920, essv12879918, essv12879962, essv12879987, essv12879983, essv12879943, essv12879926, essv12879893, essv12879939, essv12879914, essv12879972, essv12879892, essv12879966, essv12879938, essv12879897, essv12879912, essv12879976, essv12879900, essv12879940, essv12879967, essv12879929, essv12879959, essv12879931, essv12879937, essv12879925, essv12879909, essv12879901, essv12879913, essv12879957, essv12879975, essv12879977, essv12879985, essv12879889, essv12879979, essv12879890, essv12879973, essv12879927, essv12879911, essv12879984, essv12879891, essv12879968, essv12879982, essv12879907, essv12879924, essv12879895, essv12879956, essv12879908, essv12879941, essv12879970, essv12879935, essv12879906, essv12879952, essv12879958, essv12879899, essv12879986, essv12879903, essv12879905, essv12879898, essv12879953, essv12879936, essv12879904, essv12879980, essv12879950, essv12879923, essv12879919, essv12879933, essv12879971, essv12879965, essv12879885, essv12879910, essv12879921

Samples

NA20339, HG02890, NA19700, HG02481, HG03548, NA18508, HG03163, NA19399, HG02973, NA19332, HG02433, HG02337, NA18881, HG03558, HG03115, HG02012, HG02804, HG03295, HG03126, HG03297, NA19190, NA20356, HG03069, NA20359, NA19446, NA19171, NA19379, HG03086, NA19315, HG02485, HG02840, NA19198, HG01459, NA18916, HG02111, HG03079, HG02981, HG03209, NA19137, NA19238, NA19024, HG02885, NA19235, HG01440, HG02946, HG03058, NA19921, HG02879, HG02943, HG02820, NA19210, NA19707, HG03547, HG02449, NA19391, NA19327, HG01882, NA18915, HG03575, HG03081, HG02968, HG02470, HG02878, HG03311, HG03085, NA19114, NA20299, HG03136, HG03078, NA19031, NA19338, HG03046, HG02332, HG02594, HG03109, NA19436, HG02282, HG02557, NA19834, HG03461, NA19256, NA19434, HG02501, NA19473, NA19435, HG02923, NA19467, HG03473, NA19323, NA19143, HG03565, HG01912, HG03025, NA19713, HG02676, NA18873, HG02679, NA18876, NA19213, HG03077, HG03470, NA18488, HG03072, HG03303, NA19214

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3614048

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	105
Observed Complex	0
Frequency	n/a