Variant Details

Variant: esv3613841

Internal ID

7000736

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr7:79842311..79852349	hg38	UCSC Ensembl
Inner	chr7:79842311..79852349	hg38	UCSC Ensembl
Outer	chr7:79841894..79852679	hg38	UCSC Ensembl
	chr7:79471627..79481665	hg19	UCSC Ensembl
Inner	chr7:79471627..79481665	hg19	UCSC Ensembl
Outer	chr7:79471210..79481995	hg19	UCSC Ensembl

Cytoband

7q21.11

Allele length

Assembly	Allele length
hg38	10039
hg19	10039

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12860905, essv12860880, essv12860867, essv12860859, essv12860861, essv12860822, essv12860780, essv12860856, essv12860825, essv12860775, essv12860869, essv12860899, essv12860909, essv12860807, essv12860771, essv12860882, essv12860834, essv12860752, essv12860791, essv12860776, essv12860745, essv12860866, essv12860853, essv12860813, essv12860836, essv12860801, essv12860864, essv12860794, essv12860828, essv12860816, essv12860894, essv12860783, essv12860848, essv12860778, essv12860914, essv12860815, essv12860777, essv12860741, essv12860832, essv12860857, essv12860754, essv12860847, essv12860883, essv12860814, essv12860747, essv12860855, essv12860829, essv12860793, essv12860915, essv12860889, essv12860743, essv12860851, essv12860772, essv12860877, essv12860831, essv12860907, essv12860902, essv12860843, essv12860852, essv12860798, essv12860790, essv12860872, essv12860779, essv12860833, essv12860892, essv12860788, essv12860786, essv12860768, essv12860893, essv12860826, essv12860744, essv12860895, essv12860900, essv12860846, essv12860802, essv12860784, essv12860756, essv12860910, essv12860769, essv12860860, essv12860823, essv12860764, essv12860758, essv12860765, essv12860803, essv12860898, essv12860878, essv12860811, essv12860796, essv12860837, essv12860773, essv12860740, essv12860746, essv12860911, essv12860897, essv12860751, essv12860785, essv12860850, essv12860912, essv12860755, essv12860854, essv12860845, essv12860805, essv12860792, essv12860865, essv12860763, essv12860830, essv12860871, essv12860879, essv12860817, essv12860767, essv12860835, essv12860789, essv12860873, essv12860875, essv12860766, essv12860870, essv12860760, essv12860821, essv12860876, essv12860901, essv12860750, essv12860886, essv12860874, essv12860840, essv12860904, essv12860868, essv12860762, essv12860804, essv12860891, essv12860753, essv12860887, essv12860809, essv12860862, essv12860748, essv12860749, essv12860819, essv12860742, essv12860841, essv12860818, essv12860782, essv12860908, essv12860774, essv12860896, essv12860863, essv12860799, essv12860759, essv12860738, essv12860842, essv12860820, essv12860838, essv12860770, essv12860761, essv12860885, essv12860800, essv12860839, essv12860806, essv12860858, essv12860849, essv12860808, essv12860913, essv12860824, essv12860797, essv12860906, essv12860903, essv12860888, essv12860827, essv12860787, essv12860739, essv12860795, essv12860890, essv12860781, essv12860810, essv12860884, essv12860757, essv12860812, essv12860881, essv12860844

Samples

NA18502, HG02574, NA19701, HG02610, HG02496, NA18924, HG02481, HG01462, HG03052, NA19204, NA18861, NA19399, HG03175, NA18507, NA18881, HG03300, NA18877, HG03558, HG03115, HG02012, HG02870, HG03190, NA18878, HG03100, NA18504, NA20332, HG03518, HG03515, HG03297, HG03577, HG02589, HG02536, NA19098, NA18510, HG03095, HG03082, HG03464, NA19379, HG03086, HG03099, NA18489, HG02952, NA20320, HG03091, HG02541, NA18923, HG02595, HG02756, NA19131, NA18916, HG03342, NA19197, HG03105, HG02054, NA19138, NA18498, HG03479, NA20287, NA20291, HG02922, HG03079, HG02281, HG03520, NA18874, HG03045, NA19207, HG02642, HG01308, NA19172, NA19159, HG02502, NA18520, HG03225, NA19239, NA18864, NA20355, NA20342, HG03058, NA19025, HG03583, HG02477, HG03369, NA20318, NA19921, HG03120, HG02977, HG02570, NA19210, HG01248, HG03160, HG03132, HG03061, HG03088, HG02582, NA19152, NA19184, HG03291, HG02511, HG02108, NA19236, NA19982, NA18915, HG02144, HG02953, HG02307, HG02968, HG02537, NA18907, HG03123, HG03085, HG02429, NA18879, HG03382, NA19042, HG03388, HG03078, NA18912, HG02884, HG02309, HG02881, HG02979, NA19257, HG03046, HG02585, NA19160, HG02586, HG02594, NA18858, HG01204, HG02722, HG02330, NA19206, HG02557, NA19390, HG03240, NA19256, HG03367, NA19712, NA19037, HG01272, NA18865, HG03433, HG02941, HG03304, HG02839, HG03473, HG02580, HG02558, HG03103, HG03084, NA19117, NA18501, HG02974, NA19223, HG03049, HG02053, NA19713, NA19093, NA19102, NA19096, HG03401, NA19900, HG03445, HG03162, NA19129, NA19146, NA19312, HG03376, HG02465, HG02851, NA18511, NA18522, HG02808, HG03118, HG03303, HG03129, NA19431, HG03271

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3613841

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	178
Observed Complex	0
Frequency	n/a