A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3610876



Internal ID6997792
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:134282451..134283309hg38UCSC Ensembl
Innerchr6:134282478..134283282hg38UCSC Ensembl
Outerchr6:134282424..134283336hg38UCSC Ensembl
chr6:134603589..134604447hg19UCSC Ensembl
Innerchr6:134603616..134604420hg19UCSC Ensembl
Outerchr6:134603562..134604474hg19UCSC Ensembl
Cytoband6q23.2
Allele length
AssemblyAllele length
hg38859
hg19859
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv12559549, essv12559568, essv12559541, essv12559566, essv12559543, essv12559535, essv12559562, essv12559539, essv12559542, essv12559561, essv12559559, essv12559576, essv12559579, essv12559556, essv12559580, essv12559558, essv12559540, essv12559537, essv12559578, essv12559551, essv12559564, essv12559546, essv12559536, essv12559573, essv12559570, essv12559569, essv12559572, essv12559565, essv12559582, essv12559554, essv12559547, essv12559583, essv12559577, essv12559553, essv12559545, essv12559550, essv12559555, essv12559544, essv12559567, essv12559560, essv12559575, essv12559563, essv12559571, essv12559538, essv12559557, essv12559552, essv12559581, essv12559548, essv12559574
SamplesHG03514, HG01986, NA18502, HG03163, HG03300, HG03115, NA19092, NA20294, HG03139, HG03199, NA19201, HG02952, NA18498, NA19923, HG03460, NA19238, NA19172, HG02588, NA19159, NA18908, NA18867, HG02442, NA19247, HG03363, HG03511, NA18516, HG01989, NA18871, HG02555, NA18879, HG02445, NA19042, NA19113, HG01896, HG02330, NA18909, NA18517, HG02501, HG01894, HG03127, HG03108, NA19117, NA18501, HG02971, HG03279, NA20289, HG03303, HG03129, HG03265
Known GenesSGK1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3610876
Frequency
Sample Size2504
Observed Gain0
Observed Loss49
Observed Complex0
Frequencyn/a


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