A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3610253



Internal ID6650479
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:105171720..105172789hg38UCSC Ensembl
Innerchr6:105171726..105172783hg38UCSC Ensembl
Outerchr6:105171714..105172795hg38UCSC Ensembl
chr6:105619595..105620664hg19UCSC Ensembl
Innerchr6:105619601..105620658hg19UCSC Ensembl
Outerchr6:105619589..105620670hg19UCSC Ensembl
Cytoband6q21
Allele length
AssemblyAllele length
hg381070
hg191070
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv12496873, essv12496780, essv12496800, essv12496870, essv12496821, essv12496777, essv12496911, essv12496771, essv12496880, essv12496906, essv12496827, essv12496919, essv12496781, essv12496907, essv12496922, essv12496814, essv12496877, essv12496824, essv12496912, essv12496817, essv12496843, essv12496921, essv12496918, essv12496818, essv12496770, essv12496914, essv12496795, essv12496803, essv12496816, essv12496905, essv12496842, essv12496850, essv12496840, essv12496867, essv12496883, essv12496859, essv12496810, essv12496854, essv12496908, essv12496798, essv12496790, essv12496895, essv12496769, essv12496768, essv12496844, essv12496862, essv12496861, essv12496807, essv12496801, essv12496806, essv12496772, essv12496848, essv12496825, essv12496822, essv12496871, essv12496793, essv12496794, essv12496832, essv12496785, essv12496904, essv12496884, essv12496783, essv12496833, essv12496837, essv12496890, essv12496863, essv12496889, essv12496852, essv12496779, essv12496791, essv12496847, essv12496788, essv12496823, essv12496888, essv12496866, essv12496891, essv12496878, essv12496841, essv12496829, essv12496900, essv12496872, essv12496782, essv12496839, essv12496813, essv12496901, essv12496903, essv12496881, essv12496792, essv12496773, essv12496897, essv12496898, essv12496775, essv12496896, essv12496856, essv12496809, essv12496923, essv12496805, essv12496846, essv12496868, essv12496811, essv12496808, essv12496894, essv12496774, essv12496804, essv12496864, essv12496855, essv12496869, essv12496796, essv12496778, essv12496802, essv12496892, essv12496776, essv12496849, essv12496838, essv12496786, essv12496820, essv12496858, essv12496879, essv12496831, essv12496784, essv12496902, essv12496916, essv12496893, essv12496917, essv12496797, essv12496865, essv12496925, essv12496828, essv12496835, essv12496787, essv12496789, essv12496924, essv12496910, essv12496882, essv12496876, essv12496799, essv12496845, essv12496885, essv12496874, essv12496857, essv12496915, essv12496830, essv12496875, essv12496860, essv12496826, essv12496836, essv12496887, essv12496886, essv12496834, essv12496851, essv12496913, essv12496853, essv12496899, essv12496909, essv12496819, essv12496815, essv12496920, essv12496812
SamplesNA11830, HG01521, HG00143, NA20766, NA18508, HG02973, HG02702, HG00100, NA11920, HG02318, HG02852, NA20813, HG02836, HG00233, HG03558, NA19819, NA12004, HG02624, HG03518, HG00179, HG01947, HG03577, HG03680, HG03478, NA12413, HG03074, HG01571, NA19171, NA18519, HG02811, HG03385, HG03099, HG02810, HG03499, HG03091, NA20774, HG01168, NA19119, HG02756, NA07048, HG02854, HG00355, HG03479, NA19782, NA19904, HG02489, HG01893, HG01134, NA20759, HG03619, HG01069, NA19720, HG02703, HG02634, HG01673, HG02420, HG01440, NA19901, NA20884, HG03225, HG02545, NA18864, HG01058, NA20342, HG03058, NA19456, HG01275, NA20757, NA20533, HG00108, HG01603, HG00349, HG02737, HG00149, HG04039, HG02334, HG01684, HG02449, HG00101, NA20536, HG01088, NA18915, HG02775, HG02307, HG01077, HG02878, NA19776, HG00324, HG03472, NA19461, NA19114, HG03382, HG00110, HG03388, NA19113, HG03446, HG02884, HG01593, HG03024, HG01497, HG03451, HG03046, HG00276, HG00099, HG02635, HG00246, NA19625, NA12546, HG01075, HG02255, NA19308, HG02455, HG00155, HG03461, HG01954, NA19019, NA19454, HG02983, HG03899, HG00136, NA19331, NA19380, HG03850, NA19835, HG02982, NA19467, HG02139, HG03727, HG03557, HG03103, NA19376, NA19328, HG02095, HG00259, NA19468, HG02462, NA20289, HG00310, NA18873, HG03410, HG00343, NA20528, HG03401, HG02681, HG02051, HG00274, NA20503, HG01617, NA07056, HG01756, NA11892, HG02465, NA12154, HG02629, HG00180, HG03439, NA19429, NA19431
Known GenesPOPDC3
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3610253
Frequency
Sample Size2504
Observed Gain0
Observed Loss158
Observed Complex0
Frequencyn/a


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