Variant Details

Variant: esv3609896

Internal ID

6996815

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr6:89132295..89137224	hg38	UCSC Ensembl
Inner	chr6:89132296..89137223	hg38	UCSC Ensembl
Outer	chr6:89132294..89137225	hg38	UCSC Ensembl
	chr6:89842014..89846943	hg19	UCSC Ensembl
Inner	chr6:89842015..89846942	hg19	UCSC Ensembl
Outer	chr6:89842013..89846944	hg19	UCSC Ensembl

Cytoband

6q15

Allele length

Assembly	Allele length
hg38	4930
hg19	4930

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12457825, essv12457815, essv12457864, essv12457846, essv12457764, essv12457891, essv12457784, essv12457766, essv12457780, essv12457862, essv12457847, essv12457761, essv12457771, essv12457796, essv12457798, essv12457830, essv12457876, essv12457797, essv12457801, essv12457890, essv12457884, essv12457873, essv12457863, essv12457872, essv12457805, essv12457868, essv12457807, essv12457800, essv12457777, essv12457874, essv12457763, essv12457903, essv12457790, essv12457820, essv12457887, essv12457843, essv12457829, essv12457810, essv12457799, essv12457774, essv12457762, essv12457767, essv12457760, essv12457866, essv12457896, essv12457861, essv12457826, essv12457900, essv12457839, essv12457814, essv12457852, essv12457865, essv12457831, essv12457770, essv12457859, essv12457836, essv12457785, essv12457882, essv12457803, essv12457816, essv12457827, essv12457856, essv12457758, essv12457855, essv12457772, essv12457819, essv12457812, essv12457844, essv12457832, essv12457781, essv12457809, essv12457788, essv12457860, essv12457806, essv12457808, essv12457768, essv12457878, essv12457899, essv12457880, essv12457804, essv12457794, essv12457813, essv12457779, essv12457845, essv12457834, essv12457822, essv12457824, essv12457786, essv12457776, essv12457881, essv12457837, essv12457817, essv12457835, essv12457828, essv12457888, essv12457759, essv12457879, essv12457841, essv12457901, essv12457791, essv12457782, essv12457783, essv12457869, essv12457850, essv12457849, essv12457883, essv12457897, essv12457778, essv12457892, essv12457898, essv12457858, essv12457870, essv12457775, essv12457792, essv12457895, essv12457886, essv12457853, essv12457795, essv12457893, essv12457818, essv12457811, essv12457894, essv12457802, essv12457840, essv12457823, essv12457769, essv12457857, essv12457773, essv12457787, essv12457757, essv12457885, essv12457902, essv12457877, essv12457793, essv12457848, essv12457842, essv12457851, essv12457833, essv12457821, essv12457889, essv12457875, essv12457867, essv12457789, essv12457854, essv12457838, essv12457765, essv12457871

Samples

HG03514, HG03121, HG03163, HG03111, NA20274, HG02433, NA19704, HG02337, HG01188, HG03300, HG03558, HG03130, HG03521, HG03298, HG03280, NA20298, NA20332, HG02888, NA19190, NA19098, NA18870, NA19107, NA19374, HG03464, NA19171, HG03436, HG02621, NA19319, NA19201, HG03099, NA19315, HG03135, HG03499, NA19448, HG03091, NA19119, HG02595, HG02620, NA19916, HG03370, NA19197, HG03105, HG03224, NA20291, HG03079, NA19404, HG01080, NA18874, HG03268, HG02634, HG02461, NA19238, HG03045, NA19207, HG02642, NA19172, NA19317, HG02471, NA18520, HG02946, HG02427, NA19239, NA19209, HG03055, HG03583, NA18908, HG03394, HG03369, NA19451, HG02439, HG03160, HG01187, HG02582, NA19152, NA18933, HG02449, HG01882, NA19043, HG02554, HG02322, NA18871, HG03159, HG03027, HG02555, HG03472, HG03301, HG03136, HG01241, NA18912, HG02884, HG02881, NA19752, NA19320, HG03571, HG03024, HG03391, HG01286, HG03354, HG02635, NA18858, HG02568, HG01896, HG02722, HG02772, HG02813, HG02613, HG02455, HG02807, HG02557, NA19834, NA19321, NA20276, HG03539, HG01915, NA19435, NA19037, HG03117, HG02837, HG03469, NA19310, HG02464, HG03108, NA19475, HG02771, HG03039, NA20348, HG02974, NA19223, NA19351, HG03313, HG03049, HG03060, HG03258, HG02462, NA20289, HG03351, HG02768, HG02051, HG01883, NA19030, HG02947, NA19312, NA19463, HG01886, NA19346, HG03265, HG03271

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3609896

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	147
Observed Complex	0
Frequency	n/a