A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3609271



Internal ID6996193
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:63956575..63958509hg38UCSC Ensembl
Innerchr6:63956598..63958487hg38UCSC Ensembl
Outerchr6:63956553..63958532hg38UCSC Ensembl
chr6:64666468..64668402hg19UCSC Ensembl
Innerchr6:64666491..64668380hg19UCSC Ensembl
Outerchr6:64666446..64668425hg19UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg381935
hg191935
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv12390168, essv12390330, essv12390380, essv12389973, essv12390030, essv12390188, essv12390423, essv12390155, essv12390354, essv12389937, essv12390435, essv12390161, essv12390153, essv12390109, essv12389984, essv12390305, essv12390035, essv12390431, essv12390333, essv12390217, essv12390085, essv12390090, essv12389935, essv12390289, essv12390091, essv12390310, essv12390093, essv12390036, essv12390004, essv12390033, essv12389953, essv12390125, essv12390199, essv12390037, essv12390317, essv12390374, essv12390134, essv12390309, essv12390224, essv12390187, essv12389924, essv12390182, essv12390157, essv12389968, essv12390102, essv12390204, essv12389923, essv12390297, essv12390352, essv12390191, essv12390251, essv12390003, essv12390012, essv12390444, essv12390326, essv12390363, essv12390336, essv12389959, essv12390215, essv12390316, essv12389958, essv12390019, essv12390327, essv12390250, essv12390079, essv12390265, essv12390027, essv12390335, essv12390165, essv12390094, essv12389955, essv12390067, essv12390105, essv12390282, essv12389946, essv12390205, essv12390253, essv12390104, essv12390122, essv12390052, essv12390166, essv12390154, essv12390296, essv12390018, essv12389944, essv12390143, essv12390005, essv12390400, essv12390077, essv12390158, essv12390307, essv12390163, essv12390207, essv12390118, essv12389926, essv12389925, essv12390324, essv12389929, essv12390349, essv12390138, essv12390252, essv12390170, essv12390231, essv12390073, essv12390043, essv12390399, essv12390292, essv12390048, essv12390028, essv12390139, essv12389993, essv12390211, essv12390353, essv12390323, essv12390129, essv12390257, essv12390056, essv12390065, essv12390055, essv12390291, essv12390439, essv12390062, essv12390408, essv12390238, essv12390235, essv12390044, essv12390241, essv12390060, essv12390406, essv12390366, essv12390087, essv12390386, essv12390365, essv12390119, essv12390424, essv12390338, essv12390029, essv12390426, essv12389994, essv12390256, essv12390216, essv12389986, essv12390442, essv12390214, essv12390420, essv12390020, essv12390213, essv12390047, essv12390404, essv12390230, essv12390151, essv12390192, essv12389972, essv12390198, essv12390382, essv12390320, essv12389957, essv12390195, essv12390223, essv12390243, essv12390133, essv12389976, essv12390174, essv12390185, essv12390114, essv12390078, essv12390273, essv12390007, essv12390140, essv12390332, essv12390203, essv12390301, essv12390070, essv12390206, essv12390051, essv12390016, essv12390006, essv12390010, essv12390314, essv12390373, essv12390097, essv12390014, essv12389974, essv12389975, essv12390321, essv12390340, essv12390288, essv12389950, essv12389928, essv12390045, essv12389920, essv12390058, essv12390002, essv12390391, essv12389932, essv12390008, essv12389978, essv12390221, essv12390061, essv12390150, essv12390100, essv12390201, essv12390071, essv12389951, essv12390164, essv12390096, essv12390383, essv12389980, essv12390057, essv12390189, essv12390358, essv12389963, essv12390247, essv12389966, essv12390226, essv12390437, essv12390266, essv12389960, essv12390280, essv12390396, essv12390393, essv12389999, essv12390120, essv12390440, essv12390261, essv12390278, essv12390319, essv12390367, essv12390339, essv12390274, essv12389977, essv12390415, essv12390279, essv12390146, essv12390076, essv12390225, essv12390026, essv12390328, essv12390031, essv12390116, essv12390068, essv12390436, essv12390347, essv12390341, essv12389943, essv12390072, essv12389967, essv12390229, essv12390356, essv12389983, essv12390430, essv12390135, essv12390300, essv12390245, essv12390394, essv12389921, essv12390262, essv12390145, essv12389979, essv12389964, essv12390172, essv12390405, essv12390379, essv12390427, essv12390419, essv12390127, essv12390228, essv12390082, essv12389988, essv12390381, essv12390428, essv12390258, essv12390162, essv12390267, essv12390232, essv12390123, essv12390101, essv12390376, essv12390053, essv12390390, essv12390411, essv12390115, essv12390425, essv12390277, essv12390063, essv12390049, essv12390069, essv12390269, essv12389982, essv12389989, essv12390233, essv12390064, essv12390434, essv12390141, essv12390066, essv12390179, essv12390023, essv12389995, essv12390371, essv12390050, essv12390361, essv12389933, essv12390377, essv12390200, essv12390438, essv12390227, essv12390259, essv12389996, essv12390025, essv12389969, essv12390389, essv12390284, essv12390263, essv12389940, essv12390412, essv12390254, essv12390042, essv12390110, essv12390388, essv12390395, essv12390176, essv12390433, essv12390088, essv12390342, essv12390392, essv12390234, essv12390009, essv12389971, essv12390208, essv12389922, essv12390144, essv12390180, essv12389981, essv12390375, essv12390059, essv12390398, essv12390315, essv12390147, essv12390017, essv12390148, essv12390032, essv12390346, essv12390038, essv12389961, essv12390313, essv12389956, essv12390407, essv12390343, essv12389948, essv12390368, essv12390441, essv12390329, essv12390418, essv12390121, essv12390414, essv12390039, essv12390416, essv12390074, essv12390295, essv12390337, essv12390159, essv12389941, essv12390086, essv12389997, essv12390432, essv12389942, essv12389998, essv12390099, essv12390413, essv12390397, essv12389945, essv12390402, essv12390344, essv12390220, essv12390218, essv12390160, essv12390359, essv12389970, essv12390197, essv12390281, essv12390171, essv12390177, essv12389954, essv12390298, essv12390054, essv12390276, essv12390112, essv12390024, essv12390184, essv12390303, essv12390260, essv12390236, essv12390246, essv12390178, essv12390084, essv12390001, essv12390325, essv12390175, essv12390212, essv12390113, essv12390355, essv12390126, essv12390293, essv12389949, essv12390410, essv12390308, essv12390210, essv12390387, essv12390136, essv12390285, essv12389936, essv12390167, essv12390011, essv12390124, essv12390089, essv12390022, essv12390351, essv12390443, essv12390249, essv12390318, essv12390286, essv12390034, essv12390152, essv12390248, essv12389938, essv12390370, essv12390046, essv12390345, essv12390108, essv12389927, essv12390132, essv12390128, essv12389934, essv12390255, essv12390294, essv12390186, essv12390240, essv12390385, essv12390015, essv12389939, essv12390181, essv12389991, essv12390169, essv12390299, essv12390190, essv12389930, essv12390357, essv12390242, essv12390422, essv12390409, essv12389992, essv12390417, essv12390362, essv12390142, essv12390081, essv12390021, essv12389947, essv12390272, essv12389952, essv12390209, essv12390000, essv12390117, essv12390222, essv12390384, essv12390202, essv12390106, essv12389985, essv12390075, essv12389990, essv12390360, essv12390421, essv12390183, essv12390156, essv12389987, essv12390194, essv12390403, essv12390322, essv12390219, essv12390378, essv12390283, essv12390306, essv12390270, essv12390304, essv12390372, essv12390275, essv12390331, essv12390271, essv12390264, essv12390244, essv12390173, essv12390268, essv12390092, essv12390312, essv12390429, essv12390287, essv12390111, essv12390311, essv12390369, essv12390196, essv12389962, essv12390041, essv12389965, essv12390095, essv12390013, essv12390103, essv12390040, essv12390290, essv12390239, essv12390083, essv12390401, essv12390348, essv12390302, essv12390098, essv12390334, essv12390131, essv12390364, essv12389931, essv12390130, essv12390237, essv12390137, essv12390080, essv12390193, essv12390149, essv12390107, essv12390350
SamplesHG01485, HG00189, HG00650, HG01402, HG01918, HG01965, NA20891, HG00142, HG01443, NA12414, HG03687, HG01602, NA12843, NA11920, HG01326, HG00257, NA20512, HG00729, HG02691, NA19684, HG02040, HG01704, NA20894, NA12813, HG01873, HG01325, NA19678, NA20756, NA20795, NA18993, HG01492, NA07048, HG03874, NA20768, NA12762, HG01528, HG01365, HG00158, HG00281, HG00130, NA20759, HG00632, HG02597, HG01973, HG01950, HG00326, HG00323, HG01967, NA20515, NA19789, NA20904, HG03697, NA20892, NA20800, NA19070, HG01200, HG01122, HG03907, HG02253, HG01879, NA19717, NA19663, HG02731, HG02144, HG00344, HG01498, HG03775, HG02014, NA12234, NA18537, HG01102, HG01762, NA11893, HG00331, NA21112, NA19750, HG01334, HG01936, HG02219, HG00126, HG01811, HG01257, NA19729, NA19652, HG00336, HG03875, HG03949, NA20520, HG01174, HG01798, NA12763, NA12347, HG03729, HG01577, NA19785, HG01935, NA19779, HG02079, HG03716, HG00112, HG02291, NA20826, NA20503, HG00595, HG01920, HG01756, HG03815, HG01776, HG01618, NA20772, HG01507, HG00096, NA20874, HG00114, HG01441, HG00592, NA19055, NA19794, HG01303, NA11995, HG03731, NA18592, HG01359, HG01052, HG04229, HG01537, HG01079, HG00100, HG02648, HG02262, HG02035, NA18599, HG02852, HG02275, HG01389, HG01374, NA20813, HG02277, HG04164, NA20808, NA20346, HG00341, NA19669, HG02734, HG02285, NA19068, HG01250, HG01341, HG03640, NA19728, NA20890, HG00173, NA20900, HG04144, HG00330, HG01945, HG01599, HG00736, HG02374, NA19054, NA20541, HG03793, NA12761, NA18749, NA12005, NA19651, HG00120, HG00106, HG02224, NA20896, HG00262, HG03746, HG01892, NA12815, NA20884, HG01605, HG01603, NA19007, HG03709, HG01784, HG02166, NA18613, HG01384, NA12342, HG03644, HG02334, HG02697, HG00428, NA12872, HG03760, HG01612, NA19788, HG03756, NA18976, NA20770, HG01948, HG02789, HG01777, NA19000, HG03824, HG03858, HG02494, HG01197, HG02604, HG01504, HG04155, HG01383, HG01921, NA20282, HG01705, HG01708, HG01679, NA06985, HG01403, NA20828, NA21142, NA20542, HG01589, HG00128, NA20296, HG02282, HG00119, NA11881, NA18952, NA19749, NA18950, NA19732, HG01362, HG00136, NA07051, HG00631, HG01260, NA19786, HG00319, NA20803, HG03681, HG02181, HG00125, NA21125, NA19759, HG00707, HG01917, HG03646, HG00329, HG01085, HG00174, NA21101, NA12830, HG03998, NA20807, NA19726, HG00372, HG01377, HG01464, HG01191, HG01583, HG01976, HG01747, NA20511, HG04210, HG00542, HG01173, NA12842, HG01462, HG01610, HG00242, NA20783, HG02375, NA20878, HG02122, HG00315, NA20752, NA20802, HG00181, HG00449, NA12399, HG01522, HG00693, NA18969, HG02792, HG03943, HG03754, NA19764, HG01351, HG01277, HG02146, NA18567, HG04042, HG01968, HG02266, HG02301, HG01761, HG01840, HG01372, HG00185, NA20539, NA11994, NA18966, NA19722, HG00118, NA18990, HG02260, HG01133, HG01058, HG01275, HG00253, HG00365, NA18539, HG01256, HG00154, HG00268, HG01435, NA19670, NA18525, HG01670, HG00332, HG02345, HG01669, HG01979, HG00132, HG00556, HG00275, HG02165, HG01675, HG01607, HG00551, HG00239, HG04235, NA20525, NA11919, NA18626, HG01536, HG01593, NA18553, HG03953, HG01497, HG02783, NA19761, HG03672, NA12144, HG01680, HG01572, HG00240, NA18974, NA19003, HG00258, HG01980, HG02010, NA19747, HG02220, HG01685, HG01551, HG00734, HG01939, NA20790, NA20527, HG02274, NA20544, HG03727, NA19783, HG00339, HG04080, HG01086, NA06994, HG02694, HG04140, HG00259, HG02147, NA21102, HG02235, HG00342, NA19716, NA20510, NA21093, NA11843, NA19780, HG00728, HG00105, NA20502, HG01431, HG02778, HG02020, HG01125, HG00171, HG01927, NA21091, NA19676, HG02890, NA11830, HG03857, HG01098, HG00231, HG03767, HG01280, NA20532, HG00367, HG01465, HG00103, NA19777, NA19057, HG03963, HG01944, HG01456, HG01971, NA18606, NA07357, HG01140, HG00622, HG03235, HG01571, NA19792, HG01070, NA19762, HG03490, HG02491, HG01997, HG03885, NA18642, NA19782, HG01982, HG01668, HG01393, HG02786, NA18611, HG03803, NA18970, HG03897, HG02067, NA20819, HG01495, HG01281, NA19731, HG01308, HG00422, HG01405, NA18986, HG01440, HG00309, HG01259, HG00159, HG00739, HG00264, HG00260, NA18614, NA11831, HG01353, HG00313, HG00290, HG03902, HG02265, HG01248, HG00328, HG02152, NA20505, HG00190, HG01515, HG01088, NA20895, HG00320, HG02102, NA20767, NA18630, HG03021, HG01092, HG01311, HG01512, NA20299, NA19774, NA21141, NA20538, NA12249, HG03974, HG01791, HG00117, HG00613, HG00321, HG00157, HG02292, HG01890, HG01286, HG03774, NA20534, NA20765, HG01992, NA21087, HG01444, NA20522, NA12716, HG04188, HG01190, NA20804, HG00623, NA19773, HG01977, HG03850, HG00308, HG01974, HG01933, NA20516, NA20797, NA07037, HG04090, NA21126, HG04141, HG00107, HG03789, HG03863, HG01254, HG01055, HG03022, HG02239, HG00131, HG01872, HG03894, NA20528, HG01251, NA20886, NA19758, HG02284, NA21104, HG03698, HG01923, HG00362, HG01926, HG01608
Known GenesEYS
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3609271
Frequency
Sample Size2504
Observed Gain0
Observed Loss525
Observed Complex0
Frequencyn/a


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