Variant Details

Variant: esv3609087

Internal ID

6996009

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr6:56042883..56047985	hg38	UCSC Ensembl
Inner	chr6:56042883..56047985	hg38	UCSC Ensembl
Outer	chr6:56042570..56048335	hg38	UCSC Ensembl
	chr6:55907681..55912783	hg19	UCSC Ensembl
Inner	chr6:55907681..55912783	hg19	UCSC Ensembl
Outer	chr6:55907368..55913133	hg19	UCSC Ensembl

Cytoband

6p12.1

Allele length

Assembly	Allele length
hg38	5103
hg19	5103

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12363889, essv12363836, essv12363843, essv12363857, essv12363821, essv12363901, essv12363868, essv12363820, essv12363840, essv12363874, essv12363902, essv12363861, essv12363854, essv12363824, essv12363908, essv12363871, essv12363919, essv12363924, essv12363853, essv12363917, essv12363907, essv12363932, essv12363828, essv12363892, essv12363833, essv12363846, essv12363866, essv12363872, essv12363849, essv12363841, essv12363904, essv12363878, essv12363877, essv12363912, essv12363918, essv12363876, essv12363863, essv12363851, essv12363914, essv12363922, essv12363848, essv12363890, essv12363897, essv12363826, essv12363827, essv12363905, essv12363899, essv12363837, essv12363909, essv12363913, essv12363921, essv12363915, essv12363928, essv12363862, essv12363855, essv12363835, essv12363894, essv12363817, essv12363830, essv12363844, essv12363900, essv12363842, essv12363929, essv12363845, essv12363875, essv12363879, essv12363839, essv12363896, essv12363822, essv12363873, essv12363867, essv12363814, essv12363838, essv12363880, essv12363864, essv12363916, essv12363816, essv12363888, essv12363834, essv12363856, essv12363884, essv12363898, essv12363829, essv12363886, essv12363869, essv12363858, essv12363818, essv12363910, essv12363885, essv12363852, essv12363923, essv12363920, essv12363865, essv12363823, essv12363927, essv12363903, essv12363931, essv12363859, essv12363831, essv12363883, essv12363832, essv12363926, essv12363860, essv12363911, essv12363882, essv12363847, essv12363906, essv12363870, essv12363925, essv12363881, essv12363930, essv12363887, essv12363895, essv12363893, essv12363850, essv12363891, essv12363825, essv12363819, essv12363815

Samples

HG01985, NA19701, HG01402, NA19700, HG03121, NA19466, HG03548, NA19204, NA19914, HG02702, HG03241, HG03449, HG02419, HG02836, HG02798, NA18917, HG02804, NA19819, HG02624, NA19377, HG03126, HG03515, HG03139, HG03577, HG02589, HG02536, NA19443, NA18510, HG03082, HG03436, HG01506, HG03168, NA19315, NA19119, NA18923, HG03485, NA19131, HG02645, NA19197, HG03578, HG03479, NA20291, HG02981, HG02281, HG02143, HG02703, NA18874, NA19137, NA19238, HG03045, NA19024, HG02588, HG02420, NA19901, HG02427, HG01048, NA18864, HG03058, HG03055, NA20127, HG03369, HG03169, HG03343, HG02943, HG02820, NA19908, HG03160, HG03061, HG03088, NA19391, HG02108, HG03457, HG03081, HG01880, HG02497, HG01889, HG03294, HG03311, HG01390, HG03136, HG02817, NA19113, HG03024, HG03391, HG02675, NA19308, HG02330, NA19206, NA19390, NA19834, NA19321, NA19147, HG02837, HG01357, HG03469, NA19428, HG03557, HG02814, NA19818, NA19376, HG02971, NA19248, HG02974, HG03896, HG02970, HG01912, HG03066, HG01556, NA19185, HG02768, NA19096, NA19711, NA19213, HG02052, HG02051, NA19146, HG02343, HG03439, NA19214

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3609087

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	119
Observed Complex	0
Frequency	n/a