Variant Details

Variant: esv3608806

Internal ID

6995730

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr6:42869605..42871560	hg38	UCSC Ensembl
Inner	chr6:42869617..42871549	hg38	UCSC Ensembl
Outer	chr6:42869594..42871572	hg38	UCSC Ensembl
	chr6:42837343..42839298	hg19	UCSC Ensembl
Inner	chr6:42837355..42839287	hg19	UCSC Ensembl
Outer	chr6:42837332..42839310	hg19	UCSC Ensembl

Cytoband

6p21.1

Allele length

Assembly	Allele length
hg38	1956
hg19	1956

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12329220, essv12329309, essv12329170, essv12329451, essv12329342, essv12329193, essv12329267, essv12329230, essv12329311, essv12329197, essv12329187, essv12329390, essv12329206, essv12329400, essv12329181, essv12329443, essv12329299, essv12329152, essv12329268, essv12329157, essv12329228, essv12329422, essv12329415, essv12329173, essv12329289, essv12329406, essv12329221, essv12329431, essv12329213, essv12329243, essv12329226, essv12329314, essv12329175, essv12329162, essv12329438, essv12329174, essv12329378, essv12329147, essv12329156, essv12329199, essv12329176, essv12329428, essv12329233, essv12329192, essv12329334, essv12329304, essv12329325, essv12329316, essv12329150, essv12329153, essv12329444, essv12329424, essv12329161, essv12329393, essv12329227, essv12329321, essv12329238, essv12329288, essv12329179, essv12329343, essv12329347, essv12329201, essv12329165, essv12329255, essv12329144, essv12329248, essv12329369, essv12329278, essv12329348, essv12329202, essv12329436, essv12329437, essv12329405, essv12329250, essv12329408, essv12329427, essv12329148, essv12329276, essv12329385, essv12329307, essv12329333, essv12329266, essv12329246, essv12329420, essv12329349, essv12329247, essv12329155, essv12329239, essv12329138, essv12329421, essv12329184, essv12329265, essv12329275, essv12329160, essv12329402, essv12329303, essv12329273, essv12329330, essv12329362, essv12329258, essv12329259, essv12329139, essv12329328, essv12329282, essv12329376, essv12329280, essv12329345, essv12329237, essv12329142, essv12329257, essv12329418, essv12329164, essv12329189, essv12329387, essv12329218, essv12329323, essv12329298, essv12329235, essv12329445, essv12329439, essv12329401, essv12329166, essv12329318, essv12329272, essv12329264, essv12329324, essv12329294, essv12329308, essv12329297, essv12329367, essv12329287, essv12329151, essv12329158, essv12329322, essv12329435, essv12329430, essv12329210, essv12329245, essv12329315, essv12329284, essv12329274, essv12329262, essv12329232, essv12329149, essv12329450, essv12329440, essv12329291, essv12329295, essv12329441, essv12329344, essv12329159, essv12329253, essv12329242, essv12329256, essv12329310, essv12329336, essv12329261, essv12329205, essv12329186, essv12329373, essv12329366, essv12329208, essv12329196, essv12329433, essv12329337, essv12329140, essv12329448, essv12329313, essv12329234, essv12329219, essv12329449, essv12329371, essv12329209, essv12329423, essv12329419, essv12329190, essv12329382, essv12329203, essv12329224, essv12329136, essv12329292, essv12329375, essv12329327, essv12329207, essv12329389, essv12329183, essv12329447, essv12329300, essv12329163, essv12329374, essv12329251, essv12329254, essv12329453, essv12329397, essv12329354, essv12329407, essv12329285, essv12329216, essv12329172, essv12329399, essv12329398, essv12329332, essv12329185, essv12329214, essv12329281, essv12329249, essv12329182, essv12329338, essv12329352, essv12329432, essv12329168, essv12329353, essv12329350, essv12329359, essv12329271, essv12329446, essv12329403, essv12329412, essv12329394, essv12329317, essv12329364, essv12329329, essv12329169, essv12329204, essv12329357, essv12329416, essv12329231, essv12329145, essv12329141, essv12329395, essv12329225, essv12329240, essv12329386, essv12329223, essv12329171, essv12329365, essv12329326, essv12329211, essv12329391, essv12329283, essv12329410, essv12329392, essv12329384, essv12329358, essv12329320, essv12329198, essv12329372, essv12329263, essv12329260, essv12329341, essv12329137, essv12329331, essv12329290, essv12329200, essv12329194, essv12329409, essv12329414, essv12329404, essv12329452, essv12329241, essv12329351, essv12329368, essv12329361, essv12329425, essv12329319, essv12329222, essv12329229, essv12329417, essv12329270, essv12329279, essv12329252, essv12329301, essv12329215, essv12329296, essv12329380, essv12329411, essv12329188, essv12329277, essv12329442, essv12329360, essv12329217, essv12329146, essv12329339, essv12329429, essv12329434, essv12329377, essv12329379, essv12329286, essv12329363, essv12329340, essv12329302, essv12329293, essv12329346, essv12329396, essv12329177, essv12329306, essv12329413, essv12329195, essv12329191, essv12329244, essv12329355, essv12329180, essv12329143, essv12329154, essv12329335, essv12329269, essv12329356, essv12329236, essv12329388, essv12329312, essv12329426, essv12329383, essv12329305, essv12329370, essv12329381, essv12329212, essv12329178, essv12329167

Samples

HG03593, HG00650, HG01173, HG01918, NA21111, HG01462, HG03228, HG02385, HG00671, NA21127, HG01602, HG00766, HG03717, NA18999, HG02600, HG03229, HG03018, NA20863, HG00654, HG03679, NA19067, NA18969, HG03009, HG03837, HG00717, HG03645, NA18940, HG04038, HG03754, HG03722, HG02105, HG01177, NA19678, HG04042, NA18960, NA18574, HG04182, HG02301, NA21108, HG03978, HG02733, HG00334, HG00451, HG02603, HG00537, NA19079, HG00281, HG03619, HG04183, HG03910, HG02252, HG03888, NA18966, HG03814, NA21129, HG02780, HG03649, HG03585, HG00323, NA18539, HG04075, NA19921, HG02047, NA18538, HG01867, HG01200, HG03718, HG03907, HG04039, HG02142, NA19086, HG03928, HG02775, HG03900, HG00263, HG03775, NA18579, HG02522, HG01796, NA18537, HG03829, NA20903, NA20866, HG00350, HG02787, HG03631, NA20856, NA06989, HG04017, NA18553, HG02724, HG02601, HG03969, NA19761, HG03914, NA18963, HG04159, HG04176, HG03898, HG04118, NA18593, HG04093, HG03653, HG03720, HG02660, NA20851, HG04025, HG04227, HG01597, NA18564, HG03875, HG03708, HG01878, HG04186, HG02790, NA19090, NA20790, HG03702, NA20778, NA20902, NA21095, HG02019, HG03973, HG03779, HG00339, HG03729, NA18631, HG03642, NA20847, HG01935, HG01868, NA20849, HG00342, HG01846, NA20852, NA21133, HG01799, NA18609, HG03716, NA19080, HG02774, HG00274, NA19011, HG02778, HG00628, NA18968, NA18623, HG04061, NA18740, HG01805, HG01786, NA11832, HG03652, NA21089, HG03965, NA20899, HG03767, HG03738, HG03607, HG03589, NA18641, HG04002, HG02360, HG00640, HG04094, HG01465, HG00452, HG03963, HG00566, HG03667, HG02271, HG00177, NA19669, HG00879, HG04001, HG01809, NA12341, HG03235, NA19792, HG04100, NA20796, HG03705, HG03640, HG04022, NA20850, NA19723, NA18982, NA18635, HG02687, HG04144, HG00458, HG01843, NA19649, NA19771, NA21103, NA18611, HG03830, HG03793, HG03868, HG03986, HG02490, HG02067, HG02003, HG01170, HG03595, NA19719, HG03788, HG03693, NA19087, HG03995, NA19002, HG01932, HG01259, NA20845, HG03744, HG02138, NA20884, HG00637, HG03750, NA12828, HG02180, HG04029, HG03832, HG00530, HG03884, NA21122, HG03862, NA20854, HG03902, HG03844, HG02166, HG03785, NA18613, HG03908, HG00982, HG04225, HG02152, HG02697, HG01864, HG01271, HG00584, HG00533, HG00598, NA18637, HG04035, HG03945, NA21118, NA21098, HG03919, NA21116, HG03021, HG02789, HG03742, HG01073, HG03871, HG04054, HG03660, NA21141, NA20859, HG02048, HG01182, HG02292, HG04152, HG02184, HG02031, NA20828, HG03755, HG01865, NA18536, HG03991, HG03774, HG00445, NA18945, NA21143, NA18978, NA21113, HG00476, HG03778, HG02684, HG04134, NA19735, NA12775, HG02696, HG02064, HG01362, HG03689, HG02651, HG03850, NA20504, HG01260, NA18591, HG02685, NA21126, HG01991, HG01862, NA20887, HG04141, HG02398, NA19078, NA21088, HG03863, HG03998, HG00234, NA18972, NA18552, NA07056, HG03922, HG02028, NA19004, NA19758, HG04056, HG00345, HG01566, HG01869, NA21104, HG03698, HG01191, HG00978

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3608806

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	318
Observed Complex	0
Frequency	n/a