Variant Details

Variant: esv3608575

Internal ID

6995499

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr6:32058142..32061597	hg38	UCSC Ensembl
Inner	chr6:32058142..32061597	hg38	UCSC Ensembl
Outer	chr6:32057943..32061820	hg38	UCSC Ensembl
	chr6:32025919..32029374	hg19	UCSC Ensembl
Inner	chr6:32025919..32029374	hg19	UCSC Ensembl
Outer	chr6:32025720..32029597	hg19	UCSC Ensembl

Cytoband

6p21.33

Allele length

Assembly	Allele length
hg38	3456
hg19	3456

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12264074, essv12264057, essv12264082, essv12264080, essv12264058, essv12264083, essv12264085, essv12264086, essv12264091, essv12264064, essv12264077, essv12264081, essv12264089, essv12264070, essv12264078, essv12264099, essv12264093, essv12264066, essv12264092, essv12264094, essv12264096, essv12264095, essv12264067, essv12264098, essv12264084, essv12264069, essv12264101, essv12264061, essv12264065, essv12264073, essv12264072, essv12264087, essv12264059, essv12264060, essv12264062, essv12264097, essv12264075, essv12264068, essv12264063, essv12264090, essv12264100, essv12264076, essv12264071, essv12264079, essv12264088

Samples

HG02614, HG02628, HG02891, HG03130, HG03100, HG03193, NA19098, HG03372, HG03199, NA19319, HG03168, NA19198, NA19916, HG02645, HG02703, NA19372, HG03195, NA19172, HG02502, HG02623, HG03055, HG03160, NA18933, HG01882, HG02322, NA18915, NA18871, HG02537, HG03085, HG01101, HG03240, NA19256, NA19149, HG02308, NA19454, HG01551, NA19144, HG01375, HG02558, HG03442, HG03025, NA18876, NA19711, HG03401, HG03196

Known Genes

TNXB

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3608575

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	45
Observed Complex	0
Frequency	n/a