A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3608563



Internal ID6648796
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:31438388..31485154hg38UCSC Ensembl
Innerchr6:31438388..31485154hg38UCSC Ensembl
Outerchr6:31437888..31485654hg38UCSC Ensembl
chr6:31406165..31452931hg19UCSC Ensembl
Innerchr6:31406165..31452931hg19UCSC Ensembl
Outerchr6:31405665..31453431hg19UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3846767
hg1946767
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv12262570, essv12262621, essv12262583, essv12262601, essv12262581, essv12262591, essv12262559, essv12262599, essv12262602, essv12262552, essv12262580, essv12262586, essv12262605, essv12262575, essv12262558, essv12262616, essv12262553, essv12262562, essv12262573, essv12262597, essv12262566, essv12262611, essv12262579, essv12262578, essv12262613, essv12262574, essv12262598, essv12262577, essv12262567, essv12262564, essv12262557, essv12262568, essv12262620, essv12262572, essv12262610, essv12262588, essv12262576, essv12262561, essv12262619, essv12262549, essv12262563, essv12262550, essv12262556, essv12262623, essv12262569, essv12262614, essv12262606, essv12262600, essv12262571, essv12262612, essv12262594, essv12262555, essv12262582, essv12262589, essv12262565, essv12262622, essv12262585, essv12262554, essv12262551, essv12262603, essv12262617, essv12262560, essv12262596, essv12262615, essv12262595, essv12262618, essv12262607, essv12262593, essv12262587, essv12262584, essv12262604, essv12262609, essv12262590, essv12262608, essv12262592
SamplesNA18745, HG02628, HG03378, HG01303, NA19664, HG00671, HG02298, HG02433, HG02150, NA19795, HG03193, HG01051, HG03572, NA18563, NA19201, NA19764, HG01167, HG00689, HG02146, NA19723, NA18982, NA19198, NA18558, NA19649, HG02299, NA19771, NA19681, NA19079, NA19720, NA20340, HG01849, HG01369, NA19921, HG03861, HG01871, HG00557, HG02057, HG02253, HG00436, HG00533, HG02508, HG01102, NA20867, HG04054, HG01921, HG04017, NA19740, HG04063, NA19761, HG02286, NA18536, HG01572, NA19401, NA19729, HG04188, NA19149, HG02546, HG02308, NA19732, HG01939, HG01375, HG03108, NA19759, HG03025, HG02291, NA19080, NA19780, HG01794, NA19146, NA19758, HG04056, HG02425, HG02006, HG01578, NA18620
Known GenesHCG26, HCP5
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3608563
Frequency
Sample Size2504
Observed Gain0
Observed Loss75
Observed Complex0
Frequencyn/a


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