A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3607298



Internal ID6994232
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:156657719..156666903hg38UCSC Ensembl
Innerchr5:156657729..156666894hg38UCSC Ensembl
Outerchr5:156657710..156666913hg38UCSC Ensembl
chr5:156084730..156093914hg19UCSC Ensembl
Innerchr5:156084740..156093905hg19UCSC Ensembl
Outerchr5:156084721..156093924hg19UCSC Ensembl
Cytoband5q33.3
Allele length
AssemblyAllele length
hg389185
hg199185
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv12110863, essv12110952, essv12110867, essv12110940, essv12110970, essv12110941, essv12110791, essv12110874, essv12110956, essv12110923, essv12110839, essv12110959, essv12110851, essv12110860, essv12110798, essv12110889, essv12110788, essv12110852, essv12110805, essv12110933, essv12110817, essv12110886, essv12110955, essv12110931, essv12110875, essv12110849, essv12110909, essv12110877, essv12110881, essv12110981, essv12110942, essv12110969, essv12110824, essv12110876, essv12110858, essv12110907, essv12110862, essv12110810, essv12110897, essv12110971, essv12110919, essv12110979, essv12110975, essv12110812, essv12110790, essv12110893, essv12110837, essv12110835, essv12110920, essv12110832, essv12110800, essv12110854, essv12110950, essv12110884, essv12110840, essv12110834, essv12110873, essv12110864, essv12110807, essv12110910, essv12110829, essv12110792, essv12110827, essv12110954, essv12110895, essv12110866, essv12110896, essv12110842, essv12110928, essv12110965, essv12110901, essv12110978, essv12110945, essv12110796, essv12110831, essv12110803, essv12110841, essv12110917, essv12110819, essv12110934, essv12110898, essv12110905, essv12110859, essv12110967, essv12110927, essv12110885, essv12110932, essv12110882, essv12110795, essv12110887, essv12110892, essv12110848, essv12110822, essv12110820, essv12110902, essv12110836, essv12110921, essv12110900, essv12110891, essv12110823, essv12110906, essv12110879, essv12110802, essv12110872, essv12110899, essv12110870, essv12110857, essv12110799, essv12110846, essv12110845, essv12110929, essv12110888, essv12110828, essv12110811, essv12110924, essv12110957, essv12110974, essv12110878, essv12110911, essv12110789, essv12110890, essv12110815, essv12110871, essv12110804, essv12110830, essv12110821, essv12110787, essv12110922, essv12110953, essv12110865, essv12110968, essv12110808, essv12110826, essv12110916, essv12110816, essv12110903, essv12110963, essv12110814, essv12110977, essv12110801, essv12110982, essv12110844, essv12110818, essv12110935, essv12110926, essv12110847, essv12110833, essv12110883, essv12110983, essv12110825, essv12110937, essv12110838, essv12110809, essv12110797, essv12110980, essv12110944, essv12110914, essv12110913, essv12110943, essv12110853, essv12110966, essv12110972, essv12110964, essv12110946, essv12110925, essv12110912, essv12110976, essv12110904, essv12110869, essv12110856, essv12110918, essv12110880, essv12110794, essv12110930, essv12110915, essv12110850, essv12110938, essv12110949, essv12110962, essv12110960, essv12110961, essv12110951, essv12110973, essv12110868, essv12110948, essv12110908, essv12110939, essv12110947, essv12110813, essv12110793, essv12110894, essv12110936, essv12110958, essv12110861, essv12110843, essv12110855, essv12110806
SamplesHG02339, HG00235, HG02890, NA19700, HG00121, NA19909, HG03548, HG00361, NA12814, HG01885, HG02973, HG02702, HG03517, HG03449, HG01066, NA18917, HG03115, HG02891, HG00181, NA20321, HG03298, HG02476, NA19393, NA18878, HG03100, HG02624, NA18504, HG03126, HG03577, HG02888, NA19098, HG02895, NA20359, NA18510, NA07357, HG03478, NA19107, NA19379, NA18519, NA19448, NA20320, HG02485, HG03091, HG02541, NA19119, NA18923, NA19198, HG02620, NA19916, HG02549, HG03342, HG02854, HG02645, NA07347, HG03246, HG00346, NA19457, NA19138, HG02922, NA19038, HG02281, NA19720, HG02703, HG02561, HG01067, NA19383, NA18874, HG00236, NA20340, NA19372, HG02885, HG03195, NA19385, NA19172, HG02471, HG02588, NA19036, NA19026, NA20412, HG02427, HG01709, NA19445, HG00178, HG02715, NA19451, HG03270, HG00743, NA11831, HG02009, HG02943, HG02570, HG02439, HG03054, NA20787, NA19403, NA19347, NA19152, NA18933, NA19184, HG03291, NA19391, HG01882, NA19455, NA19982, HG02953, NA18910, HG02968, HG02976, HG01049, HG03294, HG02555, NA19654, NA20299, NA19449, HG03136, HG02817, HG03202, NA18856, NA12249, HG02881, HG00321, NA19320, NA18853, NA19338, HG03391, NA19257, NA19225, NA12144, NA19756, HG04159, HG03354, NA19160, NA19095, NA19395, HG01988, HG00126, NA19625, HG02568, HG02722, HG01363, NA19308, NA19206, HG02807, HG00119, NA19390, HG01190, HG03461, HG02799, HG02501, HG02983, NA19435, HG03117, HG01396, NA20351, HG00308, HG03259, HG03433, NA19439, NA21095, NA19324, NA19310, HG03304, NA19360, HG03557, HG03419, NA19376, NA19117, HG02095, HG03157, HG02970, HG02230, NA19351, HG03025, HG01302, HG03060, HG03258, HG02679, NA19096, HG00343, HG00274, NA19030, HG02947, HG02855, HG01111, NA19316, HG02465, NA12006, HG02805, HG01886, HG02808, HG03439, NA19429, NA19153, NA19431, HG03265, NA20772, HG03271
Known GenesSGCD
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3607298
Frequency
Sample Size2504
Observed Gain0
Observed Loss197
Observed Complex0
Frequencyn/a


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