Variant Details

Variant: esv3606882

Internal ID

6993817

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr5:136541079..136545106	hg38	UCSC Ensembl
Inner	chr5:136541079..136545106	hg38	UCSC Ensembl
Outer	chr5:136540788..136545497	hg38	UCSC Ensembl
	chr5:135876768..135880795	hg19	UCSC Ensembl
Inner	chr5:135876768..135880795	hg19	UCSC Ensembl
Outer	chr5:135876477..135881186	hg19	UCSC Ensembl

Cytoband

5q31.1

Allele length

Assembly	Allele length
hg38	4028
hg19	4028

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12068728, essv12068743, essv12068732, essv12068734, essv12068711, essv12068723, essv12068702, essv12068696, essv12068736, essv12068755, essv12068759, essv12068764, essv12068758, essv12068692, essv12068719, essv12068705, essv12068747, essv12068729, essv12068753, essv12068698, essv12068761, essv12068707, essv12068746, essv12068708, essv12068763, essv12068710, essv12068700, essv12068716, essv12068742, essv12068718, essv12068701, essv12068697, essv12068709, essv12068693, essv12068756, essv12068751, essv12068731, essv12068714, essv12068717, essv12068752, essv12068760, essv12068748, essv12068754, essv12068712, essv12068725, essv12068720, essv12068706, essv12068745, essv12068727, essv12068730, essv12068713, essv12068722, essv12068715, essv12068733, essv12068726, essv12068695, essv12068724, essv12068757, essv12068694, essv12068737, essv12068741, essv12068740, essv12068721, essv12068699, essv12068750, essv12068749, essv12068704, essv12068703, essv12068744, essv12068735, essv12068762, essv12068739, essv12068691, essv12068690, essv12068765, essv12068738

Samples

HG02574, NA19701, HG03121, HG03378, NA19466, HG03247, NA18881, HG02012, NA18486, HG02870, HG03298, HG02536, NA19443, NA20356, NA20359, HG03199, HG03436, HG01503, HG03099, HG03135, HG02485, HG02840, NA19197, HG03578, HG03479, NA19681, HG02816, HG02981, HG02505, NA19922, HG02561, HG03268, NA19137, NA19172, HG02420, HG02502, NA18520, NA18908, NA19200, HG02819, HG03120, HG02439, NA19247, NA19175, HG02322, HG02953, NA20126, HG01880, HG01390, HG03136, HG03388, NA19031, HG02283, NA19318, HG02635, NA18858, HG02675, HG02484, HG01896, HG02813, HG02255, HG01444, NA19390, NA19108, NA19019, HG02308, HG03458, HG02941, HG01933, NA19360, HG03419, HG02938, HG02107, HG02763, HG02855, NA19214

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3606882

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	76
Observed Complex	0
Frequency	n/a