Variant Details

Variant: esv3606276

Internal ID

6993212

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr5:111568130..111578077	hg38	UCSC Ensembl
Inner	chr5:111568130..111578077	hg38	UCSC Ensembl
Outer	chr5:111567881..111578322	hg38	UCSC Ensembl
	chr5:110903828..110913774	hg19	UCSC Ensembl
Inner	chr5:110903828..110913774	hg19	UCSC Ensembl
Outer	chr5:110903579..110914019	hg19	UCSC Ensembl

Cytoband

5q22.1

Allele length

Assembly	Allele length
hg38	9948
hg19	9947

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv12021998, essv12021868, essv12021960, essv12021870, essv12021903, essv12021969, essv12021964, essv12021943, essv12021910, essv12021899, essv12021877, essv12021949, essv12021930, essv12021951, essv12021916, essv12021935, essv12021980, essv12021953, essv12021931, essv12021983, essv12021961, essv12021922, essv12021993, essv12021977, essv12021878, essv12021944, essv12021885, essv12021902, essv12021972, essv12021909, essv12021952, essv12021895, essv12021919, essv12021978, essv12021875, essv12021882, essv12022002, essv12021989, essv12021888, essv12021890, essv12021907, essv12021881, essv12021971, essv12021934, essv12021927, essv12021908, essv12021985, essv12021894, essv12021921, essv12021938, essv12021917, essv12021905, essv12021959, essv12021884, essv12021963, essv12021896, essv12021871, essv12021997, essv12021991, essv12021876, essv12021941, essv12021968, essv12021994, essv12021984, essv12021925, essv12021979, essv12021872, essv12021932, essv12021893, essv12021967, essv12021920, essv12021987, essv12021992, essv12021947, essv12021891, essv12021883, essv12021988, essv12021886, essv12021948, essv12021898, essv12022001, essv12021962, essv12021970, essv12021990, essv12021913, essv12021982, essv12021974, essv12022000, essv12021887, essv12021914, essv12021874, essv12021995, essv12021937, essv12021966, essv12021879, essv12021869, essv12021892, essv12021904, essv12021926, essv12021880, essv12021928, essv12021965, essv12021933, essv12021915, essv12021929, essv12021901, essv12021918, essv12021973, essv12021911, essv12021939, essv12021981, essv12021954, essv12021912, essv12021906, essv12021956, essv12021873, essv12021940, essv12021900, essv12021958, essv12021889, essv12021955, essv12021924, essv12021950, essv12021945, essv12021986, essv12021946, essv12021936, essv12021999, essv12021996, essv12021942, essv12021923, essv12021975, essv12021897, essv12021957, essv12021976

Samples

HG03812, NA20874, HG02339, NA21110, HG02944, HG02652, NA19397, HG03378, NA18861, NA19914, NA21099, HG04194, HG02648, HG03558, HG04094, NA19092, NA20294, HG01802, HG00452, HG03518, HG03792, NA21128, NA19314, HG03836, HG04001, HG03999, HG03950, HG02792, NA21135, HG03099, NA19448, HG02156, NA21130, HG02687, HG03736, HG03911, NA18498, NA19384, HG03079, HG00590, HG04033, NA21109, HG03195, NA20869, NA20412, HG04185, HG04047, HG02502, NA21129, NA18520, HG02946, HG03058, NA19025, HG04029, HG03649, HG03862, HG02819, HG02479, HG03709, HG02943, HG02442, HG03780, HG02977, HG03785, HG04225, HG03787, HG03007, HG04062, HG04195, HG03291, NA19391, HG01882, HG03900, HG03775, NA21118, HG03756, HG03311, HG03730, NA19118, NA18879, HG03660, HG03476, HG02817, HG02494, NA21112, HG03078, HG01241, HG03745, HG02601, HG04152, HG01890, NA19160, HG03653, HG03064, HG03720, NA19375, HG02455, HG03833, NA18909, HG03437, NA21144, HG04239, HG02696, NA19454, HG03949, HG03695, NA20870, HG03920, NA19380, NA21123, NA19324, NA21126, NA21094, HG02814, HG03019, HG01991, NA20888, NA19818, NA19376, HG03600, NA21088, NA20868, HG03896, HG03977, NA20849, NA19351, NA21102, HG03049, HG02938, HG03872, HG03882, NA19316, HG02284, HG03931, HG02343

Known Genes

STARD4-AS1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3606276

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	135
Observed Complex	0
Frequency	n/a