Variant Details

Variant: esv3602006

Internal ID

6989040

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:121361080..121368818	hg38	UCSC Ensembl
Inner	chr4:121361080..121368818	hg38	UCSC Ensembl
Outer	chr4:121361080..121368818	hg38	UCSC Ensembl
	chr4:122282235..122289973	hg19	UCSC Ensembl
Inner	chr4:122282235..122289973	hg19	UCSC Ensembl
Outer	chr4:122282235..122289973	hg19	UCSC Ensembl

Cytoband

4q27

Allele length

Assembly	Allele length
hg38	7739
hg19	7739

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11589172, essv11589260, essv11589213, essv11589257, essv11589290, essv11589348, essv11589111, essv11589357, essv11589293, essv11589163, essv11589210, essv11589158, essv11589135, essv11589284, essv11589151, essv11589127, essv11589196, essv11589231, essv11589246, essv11589113, essv11589230, essv11589134, essv11589242, essv11589150, essv11589095, essv11589356, essv11589174, essv11589312, essv11589076, essv11589237, essv11589233, essv11589360, essv11589073, essv11589110, essv11589330, essv11589262, essv11589189, essv11589261, essv11589250, essv11589083, essv11589224, essv11589164, essv11589098, essv11589208, essv11589263, essv11589253, essv11589373, essv11589161, essv11589352, essv11589315, essv11589291, essv11589364, essv11589085, essv11589249, essv11589169, essv11589133, essv11589354, essv11589193, essv11589120, essv11589170, essv11589092, essv11589329, essv11589280, essv11589371, essv11589359, essv11589362, essv11589145, essv11589094, essv11589302, essv11589277, essv11589125, essv11589232, essv11589340, essv11589309, essv11589272, essv11589292, essv11589167, essv11589100, essv11589149, essv11589106, essv11589226, essv11589143, essv11589229, essv11589107, essv11589320, essv11589105, essv11589281, essv11589282, essv11589202, essv11589072, essv11589122, essv11589212, essv11589121, essv11589311, essv11589128, essv11589279, essv11589321, essv11589298, essv11589104, essv11589366, essv11589296, essv11589289, essv11589198, essv11589319, essv11589204, essv11589337, essv11589370, essv11589162, essv11589294, essv11589276, essv11589079, essv11589274, essv11589182, essv11589265, essv11589090, essv11589124, essv11589304, essv11589152, essv11589313, essv11589270, essv11589216, essv11589358, essv11589299, essv11589075, essv11589207, essv11589199, essv11589156, essv11589314, essv11589197, essv11589129, essv11589278, essv11589334, essv11589097, essv11589336, essv11589247, essv11589275, essv11589244, essv11589159, essv11589099, essv11589316, essv11589084, essv11589157, essv11589119, essv11589187, essv11589317, essv11589132, essv11589346, essv11589254, essv11589101, essv11589235, essv11589251, essv11589322, essv11589255, essv11589221, essv11589287, essv11589118, essv11589144, essv11589307, essv11589365, essv11589285, essv11589236, essv11589324, essv11589228, essv11589256, essv11589305, essv11589288, essv11589300, essv11589222, essv11589367, essv11589323, essv11589214, essv11589183, essv11589188, essv11589140, essv11589179, essv11589190, essv11589108, essv11589175, essv11589091, essv11589361, essv11589093, essv11589177, essv11589116, essv11589332, essv11589195, essv11589301, essv11589200, essv11589184, essv11589130, essv11589271, essv11589146, essv11589078, essv11589138, essv11589306, essv11589241, essv11589089, essv11589080, essv11589372, essv11589176, essv11589245, essv11589239, essv11589269, essv11589345, essv11589205, essv11589165, essv11589368, essv11589369, essv11589248, essv11589123, essv11589339, essv11589326, essv11589215, essv11589191, essv11589325, essv11589131, essv11589086, essv11589328, essv11589153, essv11589327, essv11589102, essv11589178, essv11589259, essv11589374, essv11589154, essv11589351, essv11589082, essv11589155, essv11589160, essv11589171, essv11589217, essv11589185, essv11589338, essv11589096, essv11589355, essv11589350, essv11589114, essv11589209, essv11589308, essv11589297, essv11589077, essv11589136, essv11589218, essv11589335, essv11589258, essv11589267, essv11589126, essv11589333, essv11589139, essv11589331, essv11589148, essv11589240, essv11589211, essv11589318, essv11589206, essv11589168, essv11589243, essv11589349, essv11589303, essv11589341, essv11589295, essv11589103, essv11589192, essv11589273, essv11589147, essv11589115, essv11589220, essv11589344, essv11589252, essv11589363, essv11589219, essv11589234, essv11589142, essv11589117, essv11589264, essv11589203, essv11589342, essv11589353, essv11589081, essv11589223, essv11589201, essv11589238, essv11589180, essv11589186, essv11589283, essv11589266, essv11589071, essv11589087, essv11589227, essv11589109, essv11589166, essv11589286, essv11589112, essv11589225, essv11589074, essv11589173, essv11589268, essv11589088, essv11589310, essv11589343, essv11589141, essv11589194, essv11589137, essv11589181, essv11589347

Samples

HG00189, NA19701, NA20339, HG00650, HG00542, HG03121, HG02481, NA20766, HG01624, HG00671, NA18647, NA18979, HG03449, NA20512, NA18528, HG01806, HG00181, HG02600, NA19355, HG03616, HG01486, HG02624, NA18530, HG03126, HG00115, HG03193, NA19443, HG01704, NA18633, NA18988, NA18627, HG00138, HG03645, HG03436, HG01506, NA19319, HG02016, HG03452, NA20589, HG01676, HG00674, HG00599, HG02840, HG01766, NA18558, NA18547, HG03342, HG01761, HG01528, HG02733, HG02561, HG00335, NA18868, HG02389, HG02187, NA12044, NA11994, NA19235, HG01844, NA18557, NA18985, HG00326, HG03394, NA19789, NA20755, HG03784, HG01851, HG02716, HG02943, HG00154, NA19908, NA18747, NA20800, HG00443, HG03132, HG01200, NA18525, HG03718, NA19403, HG02142, HG03990, HG02678, HG02449, HG01879, HG01142, NA20832, NA18572, NA18534, HG01029, HG01889, HG00692, NA19064, HG00404, HG02141, HG04017, HG01101, NA18553, NA18555, NA18523, NA18531, HG04176, HG04118, NA18858, HG04093, HG00376, NA18974, HG03064, HG02557, HG01597, HG00625, NA20870, HG03117, NA20520, NA21123, NA20530, HG01866, HG03870, HG01113, NA20544, HG02019, NA18610, HG01489, HG01342, HG03729, HG02379, HG00381, HG01912, NA19223, NA19468, HG03279, NA19093, NA19900, NA19121, HG01125, HG00628, NA18624, NA18623, NA19346, HG00255, NA19676, NA18620, HG04212, HG03096, HG00114, HG00235, NA19222, HG02610, HG03731, NA12814, HG00351, HG03821, HG03237, HG00100, HG02648, HG04202, NA18507, NA18881, NA18917, NA18603, HG02891, NA19795, HG02058, HG00364, HG03100, NA18625, HG03297, HG00179, NA19098, NA18870, NA18526, HG01694, HG03199, HG01341, NA18944, NA18550, NA12812, NA18595, HG00448, HG03976, HG02541, HG00173, HG01710, HG02655, HG02374, HG00851, NA18642, NA12283, HG01354, HG03479, NA20513, NA18964, HG02922, HG02786, HG02111, HG03868, HG03209, HG01455, HG03189, HG02395, HG02315, HG00379, NA18874, HG03968, HG02512, HG02067, NA18977, NA19917, NA19075, NA18617, HG03195, NA19317, HG01892, NA19087, HG03995, HG02420, NA19159, HG00182, HG02946, HG00637, HG03058, HG02180, NA18908, HG00419, NA19007, HG01183, HG02570, HG03160, HG00176, HG00190, NA20809, HG00701, NA18991, HG00475, NA19236, NA18915, HG00320, HG00533, HG00500, HG04019, NA18910, NA18630, HG02976, HG03563, HG03382, HG03136, NA18499, HG00613, HG00525, NA19257, HG02725, NA19225, NA20828, NA18634, NA18945, NA18646, NA19436, NA18608, NA18978, HG00476, NA18542, NA18535, NA19834, NA18543, HG03461, NA12775, HG02501, HG00565, HG04239, NA18950, HG03899, NA19435, NA18941, HG00623, NA19380, NA19144, NA18992, HG03433, NA18629, NA20516, NA20803, NA21126, HG03557, HG03565, HG00421, HG00329, HG03863, HG00656, HG02392, HG01254, HG00174, HG02410, NA20807, HG03410, HG00698, HG00472, HG04056, HG03072, HG02284, HG01886, HG03118, HG01578, NA19153, NA12776, HG03196

Known Genes

QRFPR

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3602006

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	304
Observed Complex	0
Frequency	n/a