Variant Details

Variant: esv3601179

Internal ID

6988218

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:82714743..82719895	hg38	UCSC Ensembl
	chr4:83635896..83641048	hg19	UCSC Ensembl

Cytoband

4q21.22

Allele length

Assembly	Allele length
hg38	5153
hg19	5153

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11521078, essv11521094, essv11521060, essv11521049, essv11521090, essv11521083, essv11521092, essv11521071, essv11521052, essv11521082, essv11521059, essv11521056, essv11521070, essv11521062, essv11521084, essv11521072, essv11521043, essv11521080, essv11521047, essv11521093, essv11521061, essv11521051, essv11521067, essv11521050, essv11521077, essv11521087, essv11521063, essv11521065, essv11521081, essv11521057, essv11521055, essv11521073, essv11521079, essv11521085, essv11521066, essv11521076, essv11521086, essv11521058, essv11521048, essv11521069, essv11521053, essv11521095, essv11521074, essv11521054, essv11521064, essv11521088, essv11521068, essv11521046, essv11521045, essv11521075, essv11521089, essv11521044, essv11521096, essv11521091

Samples

HG03559, HG01402, NA19332, HG03111, NA18877, HG02804, NA19819, HG03126, HG03515, HG02536, HG00641, NA19119, NA18916, HG02645, NA19457, NA18498, HG03479, HG02489, NA12275, NA20278, NA18868, HG03073, NA19451, NA19175, NA19455, HG02953, HG02307, NA19118, HG02577, HG02884, HG02086, HG02635, HG03109, HG01075, NA19834, HG03367, NA19473, NA19435, NA19331, NA19380, HG03259, HG02558, NA19323, NA19248, HG03025, HG02053, NA19474, HG03410, HG01883, HG02763, NA19430, HG02855, HG03198, NA19214

Known Genes

SCD5

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3601179

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	54
Observed Complex	0
Frequency	n/a