A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3601077



Internal ID6988116
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:77570725..77576285hg38UCSC Ensembl
Innerchr4:77570748..77576263hg38UCSC Ensembl
Outerchr4:77570703..77576308hg38UCSC Ensembl
chr4:78491879..78497439hg19UCSC Ensembl
Innerchr4:78491902..78497417hg19UCSC Ensembl
Outerchr4:78491857..78497462hg19UCSC Ensembl
Cytoband4q21.1
Allele length
AssemblyAllele length
hg385561
hg195561
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv11509675, essv11509720, essv11509719, essv11509713, essv11509703, essv11509673, essv11509692, essv11509694, essv11509685, essv11509699, essv11509711, essv11509716, essv11509681, essv11509679, essv11509677, essv11509687, essv11509722, essv11509709, essv11509686, essv11509674, essv11509708, essv11509689, essv11509717, essv11509698, essv11509684, essv11509682, essv11509704, essv11509697, essv11509683, essv11509718, essv11509721, essv11509714, essv11509701, essv11509705, essv11509700, essv11509706, essv11509693, essv11509712, essv11509688, essv11509680, essv11509678, essv11509695, essv11509710, essv11509690, essv11509702, essv11509696, essv11509715, essv11509691, essv11509707, essv11509676
SamplesHG03096, NA19701, NA19222, HG02481, NA20274, NA19378, HG02433, HG03449, HG02798, NA18486, NA20294, NA19355, HG03372, NA20356, HG03082, NA19307, NA19198, NA18916, NA18498, NA20291, NA19922, NA19024, NA19235, NA19036, NA19026, NA20412, HG03169, HG03120, NA19984, HG03294, HG03311, HG03301, NA18879, NA19452, HG01890, NA19395, HG01896, HG01363, NA19321, HG02983, NA19037, HG01494, NA18501, HG02095, HG03157, NA19438, HG03025, HG02768, HG03401, NA19146
Known GenesCXCL13
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3601077
Frequency
Sample Size2504
Observed Gain0
Observed Loss50
Observed Complex0
Frequencyn/a


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