Variant Details

Variant: esv3600531

Internal ID

6987573

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:53699664..53701607	hg38	UCSC Ensembl
Inner	chr4:53699665..53701607	hg38	UCSC Ensembl
Outer	chr4:53699664..53701608	hg38	UCSC Ensembl
	chr4:54565831..54567774	hg19	UCSC Ensembl
Inner	chr4:54565832..54567774	hg19	UCSC Ensembl
Outer	chr4:54565831..54567775	hg19	UCSC Ensembl

Cytoband

4q12

Allele length

Assembly	Allele length
hg38	1944
hg19	1944

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11438307, essv11438275, essv11438217, essv11438268, essv11438167, essv11438126, essv11438208, essv11438215, essv11438136, essv11438297, essv11438205, essv11438185, essv11438151, essv11438169, essv11438216, essv11438302, essv11438239, essv11438145, essv11438206, essv11438295, essv11438225, essv11438125, essv11438251, essv11438265, essv11438147, essv11438248, essv11438227, essv11438137, essv11438197, essv11438143, essv11438214, essv11438257, essv11438133, essv11438193, essv11438183, essv11438142, essv11438128, essv11438277, essv11438168, essv11438162, essv11438231, essv11438220, essv11438310, essv11438300, essv11438204, essv11438164, essv11438238, essv11438228, essv11438289, essv11438299, essv11438253, essv11438274, essv11438270, essv11438242, essv11438259, essv11438233, essv11438155, essv11438210, essv11438179, essv11438234, essv11438209, essv11438156, essv11438180, essv11438232, essv11438213, essv11438260, essv11438258, essv11438256, essv11438280, essv11438189, essv11438190, essv11438131, essv11438284, essv11438195, essv11438218, essv11438191, essv11438173, essv11438309, essv11438264, essv11438207, essv11438198, essv11438229, essv11438303, essv11438262, essv11438245, essv11438140, essv11438138, essv11438144, essv11438177, essv11438273, essv11438290, essv11438285, essv11438301, essv11438263, essv11438240, essv11438176, essv11438237, essv11438196, essv11438304, essv11438161, essv11438150, essv11438249, essv11438129, essv11438146, essv11438311, essv11438181, essv11438170, essv11438211, essv11438127, essv11438221, essv11438252, essv11438255, essv11438261, essv11438132, essv11438236, essv11438188, essv11438287, essv11438281, essv11438199, essv11438288, essv11438235, essv11438226, essv11438254, essv11438192, essv11438134, essv11438223, essv11438266, essv11438139, essv11438186, essv11438219, essv11438271, essv11438174, essv11438306, essv11438272, essv11438130, essv11438172, essv11438291, essv11438283, essv11438200, essv11438279, essv11438278, essv11438158, essv11438119, essv11438148, essv11438123, essv11438124, essv11438224, essv11438135, essv11438276, essv11438305, essv11438244, essv11438298, essv11438171, essv11438267, essv11438203, essv11438122, essv11438182, essv11438222, essv11438243, essv11438246, essv11438178, essv11438154, essv11438286, essv11438230, essv11438296, essv11438184, essv11438308, essv11438187, essv11438201, essv11438141, essv11438194, essv11438121, essv11438241, essv11438212, essv11438118, essv11438159, essv11438153, essv11438175, essv11438166, essv11438293, essv11438282, essv11438117, essv11438294, essv11438152, essv11438202, essv11438163, essv11438157, essv11438149, essv11438165, essv11438292, essv11438160, essv11438120, essv11438247, essv11438269, essv11438250

Samples

HG00255, HG02760, NA20588, HG02614, HG00114, HG02339, NA20339, NA19028, HG03366, HG03484, HG02628, HG00231, NA19397, NA18924, HG02583, HG00142, NA19204, HG03163, HG01773, HG00358, NA20514, NA18507, HG02337, NA20531, HG03241, HG02419, HG01066, NA19020, NA18877, HG02804, NA20294, HG03100, HG02888, NA19443, HG01051, NA20356, HG03069, HG03478, HG03095, NA19446, NA19746, HG01070, NA19201, HG03099, NA18489, HG03452, HG01702, HG03499, HG01351, HG01064, NA20320, HG02485, NA19307, NA18923, HG02595, HG02620, NA19916, HG01459, HG02266, HG00736, HG00346, NA19023, NA12762, HG01063, NA20287, NA19384, NA20291, HG02489, NA19404, NA12761, NA11930, HG01134, HG01067, HG00120, HG02315, NA19719, NA19372, NA19024, HG03195, HG02642, NA19385, NA12815, NA19159, NA19901, HG03380, HG00118, HG00637, NA19209, HG02623, NA20533, NA20127, HG02715, NA18867, HG03048, HG03120, HG03054, HG01248, HG01360, HG00183, NA19707, NA19403, NA19462, NA18933, NA19984, HG01684, NA19391, HG01882, HG01879, NA19455, HG01088, HG03457, HG02953, HG02014, HG02497, HG00239, HG02555, HG00740, NA18907, HG01047, HG03123, HG03301, NA19118, HG03382, HG03136, NA20581, HG03388, HG01707, NA19031, NA18856, HG03446, HG03740, HG02283, HG03024, HG03046, NA19452, HG02256, HG01403, HG02332, HG00099, NA12546, HG01075, NA20765, HG03567, NA20296, HG03064, NA19401, NA19375, HG02330, HG00258, NA20522, NA19652, NA19440, HG02807, HG02557, NA19390, HG00265, NA19321, NA19108, NA19256, HG00136, HG02923, NA19144, NA12046, HG02232, HG03469, NA19439, HG02580, NA19360, HG01991, HG00269, HG01785, HG03432, HG03442, NA19438, HG02970, HG02646, HG00378, NA12749, NA19468, HG01055, HG02676, HG00234, NA19711, HG03077, HG00343, NA20528, HG01105, HG02052, HG02051, HG00274, NA19121, HG03445, NA19312, NA18511, HG01776

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3600531

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	195
Observed Complex	0
Frequency	n/a