Variant Details

Variant: esv3600285

Internal ID

6987329

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:39537534..39538246	hg38	UCSC Ensembl
Inner	chr4:39537539..39538241	hg38	UCSC Ensembl
Outer	chr4:39537529..39538251	hg38	UCSC Ensembl
	chr4:39539154..39539866	hg19	UCSC Ensembl
Inner	chr4:39539159..39539861	hg19	UCSC Ensembl
Outer	chr4:39539149..39539871	hg19	UCSC Ensembl

Cytoband

4p14

Allele length

Assembly	Allele length
hg38	713
hg19	713

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11401325, essv11401356, essv11401309, essv11401375, essv11401284, essv11401256, essv11401295, essv11401369, essv11401285, essv11401236, essv11401328, essv11401374, essv11401313, essv11401365, essv11401339, essv11401268, essv11401364, essv11401305, essv11401291, essv11401302, essv11401322, essv11401253, essv11401362, essv11401255, essv11401316, essv11401270, essv11401264, essv11401239, essv11401368, essv11401361, essv11401352, essv11401301, essv11401331, essv11401279, essv11401324, essv11401259, essv11401336, essv11401286, essv11401326, essv11401338, essv11401347, essv11401330, essv11401273, essv11401282, essv11401342, essv11401346, essv11401308, essv11401353, essv11401267, essv11401373, essv11401294, essv11401257, essv11401350, essv11401310, essv11401351, essv11401320, essv11401252, essv11401306, essv11401288, essv11401260, essv11401332, essv11401275, essv11401300, essv11401274, essv11401247, essv11401298, essv11401250, essv11401377, essv11401292, essv11401245, essv11401319, essv11401290, essv11401304, essv11401363, essv11401241, essv11401289, essv11401333, essv11401269, essv11401246, essv11401366, essv11401281, essv11401312, essv11401276, essv11401265, essv11401307, essv11401263, essv11401277, essv11401357, essv11401235, essv11401367, essv11401303, essv11401293, essv11401329, essv11401283, essv11401242, essv11401371, essv11401358, essv11401240, essv11401278, essv11401261, essv11401244, essv11401344, essv11401372, essv11401243, essv11401379, essv11401272, essv11401262, essv11401238, essv11401378, essv11401349, essv11401296, essv11401237, essv11401370, essv11401341, essv11401299, essv11401280, essv11401335, essv11401348, essv11401318, essv11401321, essv11401334, essv11401248, essv11401343, essv11401251, essv11401323, essv11401345, essv11401340, essv11401271, essv11401337, essv11401249, essv11401254, essv11401287, essv11401360, essv11401354, essv11401315, essv11401314, essv11401311, essv11401359, essv11401297, essv11401355, essv11401258, essv11401376, essv11401327, essv11401317, essv11401266

Samples

HG01985, HG03366, HG04096, HG03484, NA20853, HG01462, HG00351, NA21099, NA18561, HG02337, HG03300, HG02419, HG00457, HG03130, HG01806, NA20321, HG02277, HG03229, HG03895, HG02384, HG03478, NA18969, HG03095, HG03572, HG01500, HG00717, HG03082, HG01571, HG00122, NA18597, NA20861, NA20320, HG02383, NA20756, HG03370, HG00458, HG02301, NA18642, NA19088, HG02054, HG01063, NA19138, HG00369, NA21103, NA18964, HG02111, NA11930, HG02252, HG02512, HG02634, NA19917, HG01849, HG00534, NA21107, HG01525, HG03352, HG01932, HG03380, HG00406, HG03267, NA19445, NA18908, NA19451, NA19027, HG01851, NA18614, NA12760, HG01867, HG00982, HG00380, HG01797, HG02513, NA21119, HG03760, HG04195, HG01515, HG00101, HG00475, HG00368, HG03711, HG02953, HG00500, HG04035, HG01941, HG02497, HG01808, HG01796, HG00551, HG02537, HG00273, HG01414, HG00651, NA21086, HG02577, NA19320, HG03745, HG03991, HG00126, NA21142, NA18634, HG02399, HG01811, HG02813, HG01363, NA12716, NA19390, NA19108, HG04026, HG02088, NA19072, HG01800, HG00136, HG02314, HG03469, HG03127, HG01951, HG03870, HG03304, HG01933, HG01113, HG00116, HG03419, HG02137, NA20888, HG02379, HG03642, HG02238, HG01846, HG02116, HG02013, NA19726, HG02182, HG03538, HG01914, HG03162, NA18957, HG01920, HG01111, NA18623, HG02351, HG03198, HG02406, HG01927, HG03196, HG01926

Known Genes

MIR1273H, UGDH-AS1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3600285

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	145
Observed Complex	0
Frequency	n/a