Variant Details

Variant: esv3597423

Internal ID

6972269

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr3:112837697..112838280	hg38	UCSC Ensembl
Inner	chr3:112837697..112838280	hg38	UCSC Ensembl
Outer	chr3:112837360..112838533	hg38	UCSC Ensembl
	chr3:112556544..112557127	hg19	UCSC Ensembl
Inner	chr3:112556544..112557127	hg19	UCSC Ensembl
Outer	chr3:112556207..112557380	hg19	UCSC Ensembl

Cytoband

3q13.2

Allele length

Assembly	Allele length
hg38	584
hg19	584

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11105053, essv11105132, essv11105091, essv11105076, essv11105057, essv11105113, essv11105097, essv11105133, essv11105065, essv11105054, essv11105046, essv11105117, essv11105116, essv11105047, essv11105124, essv11105120, essv11105080, essv11105122, essv11105112, essv11105089, essv11105104, essv11105083, essv11105050, essv11105088, essv11105090, essv11105130, essv11105058, essv11105051, essv11105129, essv11105078, essv11105121, essv11105092, essv11105101, essv11105077, essv11105100, essv11105135, essv11105052, essv11105064, essv11105095, essv11105102, essv11105093, essv11105067, essv11105106, essv11105128, essv11105084, essv11105099, essv11105136, essv11105109, essv11105059, essv11105060, essv11105079, essv11105071, essv11105072, essv11105094, essv11105134, essv11105073, essv11105096, essv11105103, essv11105125, essv11105086, essv11105123, essv11105087, essv11105110, essv11105045, essv11105066, essv11105061, essv11105127, essv11105069, essv11105068, essv11105107, essv11105119, essv11105108, essv11105049, essv11105114, essv11105063, essv11105105, essv11105098, essv11105056, essv11105118, essv11105126, essv11105055, essv11105074, essv11105138, essv11105115, essv11105070, essv11105075, essv11105111, essv11105081, essv11105137, essv11105131, essv11105082, essv11105085, essv11105062, essv11105048

Samples

NA19394, HG02890, NA19141, HG03378, NA19909, HG02973, NA19378, NA19020, NA19350, NA19092, NA19355, NA19819, HG02624, NA19377, HG03297, NA20346, NA19314, NA19201, HG03091, NA19198, HG02595, HG03342, NA20287, HG03040, NA19038, HG02143, HG02703, NA18874, HG03212, HG01072, NA19372, HG03045, NA19024, NA19235, NA19207, NA19385, NA19172, HG03225, NA19445, NA19025, HG02819, HG02943, HG01136, HG03061, NA19462, NA19913, NA19043, HG03575, HG03081, HG02968, HG02497, HG02976, HG02878, HG02537, HG03202, NA18499, NA19099, HG03451, HG02585, NA19160, HG01896, HG02722, NA20296, NA19401, NA19390, NA19256, NA19434, HG02010, NA19747, NA19454, NA19380, HG02611, NA19428, HG03304, HG01342, HG03084, NA19117, HG03157, NA19472, HG03313, NA20334, NA19468, HG03351, NA19102, NA19096, HG01105, NA19900, HG02861, NA19129, NA18522, NA19429, NA19431, HG03265, HG03271

Known Genes

CD200R1L

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3597423

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	94
Observed Complex	0
Frequency	n/a