A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3596953



Internal ID6637223
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:89344940..89369511hg38UCSC Ensembl
chr3:89394090..89418661hg19UCSC Ensembl
Cytoband3p11.1
Allele length
AssemblyAllele length
hg3824572
hg1924572
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv11068825, essv11068813, essv11068786, essv11068792, essv11068807, essv11068806, essv11068859, essv11068853, essv11068787, essv11068784, essv11068781, essv11068835, essv11068860, essv11068769, essv11068800, essv11068829, essv11068849, essv11068870, essv11068865, essv11068840, essv11068791, essv11068816, essv11068765, essv11068802, essv11068821, essv11068764, essv11068774, essv11068852, essv11068850, essv11068874, essv11068831, essv11068817, essv11068828, essv11068837, essv11068868, essv11068809, essv11068836, essv11068855, essv11068830, essv11068766, essv11068777, essv11068861, essv11068782, essv11068796, essv11068772, essv11068826, essv11068763, essv11068824, essv11068841, essv11068795, essv11068814, essv11068788, essv11068803, essv11068822, essv11068843, essv11068780, essv11068844, essv11068799, essv11068770, essv11068771, essv11068818, essv11068785, essv11068775, essv11068863, essv11068851, essv11068839, essv11068810, essv11068867, essv11068873, essv11068846, essv11068793, essv11068857, essv11068797, essv11068866, essv11068827, essv11068838, essv11068869, essv11068872, essv11068805, essv11068862, essv11068832, essv11068871, essv11068790, essv11068819, essv11068833, essv11068794, essv11068783, essv11068845, essv11068858, essv11068773, essv11068778, essv11068789, essv11068842, essv11068834, essv11068804, essv11068798, essv11068820, essv11068864, essv11068808, essv11068779, essv11068815, essv11068767, essv11068776, essv11068811, essv11068848, essv11068847, essv11068801, essv11068856, essv11068854, essv11068768, essv11068823, essv11068812
SamplesHG01613, HG03755, HG01515, HG00313, HG01768, NA20514, HG03785, HG01675, HG02371, HG01530, NA20527, HG01612, NA18630, HG01052, NA11920, HG00245, HG00632, HG01800, HG01935, HG01389, NA20775, HG01403, NA20511, HG01085, HG01492, NA20800, HG01685, HG00368, NA20778, HG01350, HG01704, HG01131, HG02231, HG01204, NA19648, HG00366, HG03960, HG04020, HG00253, HG01860, NA20755, HG01682, HG00353, HG03687, HG01521, HG01784, HG00342, HG00266, HG01765, NA20849, HG01510, HG01312, HG01672, HG02700, HG01414, NA18536, HG00140, HG02221, HG01866, HG01785, HG01620, NA12761, NA11843, HG01527, NA11894, NA19679, HG01362, HG01747, HG01874, HG04017, HG01097, HG01280, HG04070, HG04173, HG03931, HG00273, HG01786, NA20774, HG01351, HG01702, HG01880, HG01190, HG04155, HG03589, HG00181, NA20827, HG01673, HG03238, NA20318, HG00311, HG01669, NA19818, HG01390, NA20317, NA20810, HG01164, NA20758, HG02682, NA11932, NA20904, NA20528, HG01522, HG01102, HG02188, HG00336, NA19007, NA19661, NA19779, HG01474, NA19746, HG01067, HG01536
Known GenesEPHA3
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3596953
Frequency
Sample Size2504
Observed Gain0
Observed Loss112
Observed Complex0
Frequencyn/a


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