A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3596822



Internal ID6984136
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:84650261..84653770hg38UCSC Ensembl
chr3:84699412..84702921hg19UCSC Ensembl
Cytoband3p12.1
Allele length
AssemblyAllele length
hg383510
hg193510
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv11060984, essv11061159, essv11060977, essv11060882, essv11061007, essv11061160, essv11060889, essv11061200, essv11060831, essv11061027, essv11061187, essv11061023, essv11061177, essv11061031, essv11061028, essv11061012, essv11060814, essv11061106, essv11061063, essv11060900, essv11061026, essv11061157, essv11060913, essv11061042, essv11060905, essv11061022, essv11061202, essv11061194, essv11061166, essv11061213, essv11061146, essv11060971, essv11061195, essv11061183, essv11060911, essv11060844, essv11060989, essv11060901, essv11061016, essv11061108, essv11061019, essv11061208, essv11060849, essv11061041, essv11061079, essv11061006, essv11061071, essv11060990, essv11061074, essv11060960, essv11061224, essv11061149, essv11061057, essv11061047, essv11060872, essv11061125, essv11061096, essv11060888, essv11061004, essv11060848, essv11061009, essv11061209, essv11061104, essv11060820, essv11060908, essv11061054, essv11060894, essv11061115, essv11060835, essv11061204, essv11061097, essv11060928, essv11060861, essv11060839, essv11061033, essv11061064, essv11060978, essv11060986, essv11060842, essv11060991, essv11060953, essv11060910, essv11061175, essv11061112, essv11060880, essv11061089, essv11061137, essv11060885, essv11061086, essv11061038, essv11060987, essv11061075, essv11061122, essv11060830, essv11061223, essv11061060, essv11061095, essv11061119, essv11060982, essv11060952, essv11060811, essv11061058, essv11061205, essv11060918, essv11060878, essv11060955, essv11061003, essv11061053, essv11060932, essv11061180, essv11061215, essv11061182, essv11060859, essv11061098, essv11061225, essv11060909, essv11061080, essv11061021, essv11060875, essv11061130, essv11060963, essv11060863, essv11060898, essv11061162, essv11060973, essv11061171, essv11060837, essv11060838, essv11061032, essv11060903, essv11060964, essv11060927, essv11060822, essv11061203, essv11061141, essv11061030, essv11061024, essv11060937, essv11060972, essv11060860, essv11061093, essv11060921, essv11061107, essv11061056, essv11060976, essv11060886, essv11060947, essv11060940, essv11060915, essv11061067, essv11060850, essv11061020, essv11060997, essv11060876, essv11060833, essv11060866, essv11060917, essv11060988, essv11060870, essv11061065, essv11060828, essv11060993, essv11061176, essv11061051, essv11060926, essv11061190, essv11061185, essv11061005, essv11061014, essv11060871, essv11060877, essv11061117, essv11060994, essv11060985, essv11060958, essv11060942, essv11060825, essv11061110, essv11061061, essv11061001, essv11060857, essv11061037, essv11060893, essv11060943, essv11060995, essv11061136, essv11061094, essv11061050, essv11061082, essv11060827, essv11060970, essv11060950, essv11061135, essv11061055, essv11061011, essv11061116, essv11061084, essv11060807, essv11061189, essv11061173, essv11061165, essv11060836, essv11061092, essv11061206, essv11061184, essv11061179, essv11060920, essv11060853, essv11060962, essv11061201, essv11060967, essv11061044, essv11060879, essv11060815, essv11060948, essv11060887, essv11060818, essv11061153, essv11060946, essv11061148, essv11060864, essv11060851, essv11061199, essv11060961, essv11061211, essv11060862, essv11060884, essv11061197, essv11061150, essv11061040, essv11060826, essv11061128, essv11061091, essv11061147, essv11060856, essv11060923, essv11061085, essv11061154, essv11060944, essv11061226, essv11061193, essv11061151, essv11061220, essv11060821, essv11061178, essv11060959, essv11060897, essv11060832, essv11061140, essv11061210, essv11061129, essv11061158, essv11060945, essv11061142, essv11061013, essv11061167, essv11060824, essv11061228, essv11061069, essv11060936, essv11061100, essv11060858, essv11061222, essv11061172, essv11061217, essv11061066, essv11061191, essv11061181, essv11060841, essv11061048, essv11060873, essv11061138, essv11060980, essv11060881, essv11060883, essv11061077, essv11061123, essv11061002, essv11061229, essv11061192, essv11060899, essv11060865, essv11060981, essv11061010, essv11061164, essv11061139, essv11061083, essv11060812, essv11060912, essv11061169, essv11061018, essv11060957, essv11061214, essv11060907, essv11060874, essv11060895, essv11060843, essv11060896, essv11061102, essv11061127, essv11060951, essv11060809, essv11061045, essv11061230, essv11061099, essv11060949, essv11060919, essv11061062, essv11060975, essv11061111, essv11061036, essv11060938, essv11060931, essv11061219, essv11061118, essv11060983, essv11061105, essv11061120, essv11061198, essv11061124, essv11060869, essv11061168, essv11060891, essv11061035, essv11060968, essv11061132, essv11060934, essv11061163, essv11061212, essv11061143, essv11061131, essv11061090, essv11061088, essv11061046, essv11060930, essv11061070, essv11060992, essv11060840, essv11061188, essv11060817, essv11060998, essv11060974, essv11061087, essv11061186, essv11060846, essv11060808, essv11061218, essv11061152, essv11060924, essv11060854, essv11061126, essv11061103, essv11061145, essv11061008, essv11061121, essv11060969, essv11060922, essv11060829, essv11060868, essv11060979, essv11061109, essv11060890, essv11060855, essv11061113, essv11060933, essv11061196, essv11061068, essv11061043, essv11060823, essv11060996, essv11060914, essv11060892, essv11060904, essv11060816, essv11061078, essv11061073, essv11060906, essv11061017, essv11060939, essv11060929, essv11061227, essv11060847, essv11061052, essv11061029, essv11060810, essv11061059, essv11060902, essv11061144, essv11060852, essv11061174, essv11061156, essv11061015, essv11061170, essv11061049, essv11061039, essv11061221, essv11060845, essv11060925, essv11060834, essv11060813, essv11061101, essv11060916, essv11061155, essv11060966, essv11061207, essv11061025, essv11061072, essv11060819, essv11061076, essv11061114, essv11061133, essv11061081, essv11060965, essv11060935, essv11060941, essv11060867, essv11061216, essv11061134, essv11061161, essv11060954, essv11060999, essv11061000, essv11061034, essv11060956
SamplesHG01850, HG00542, HG01412, HG00442, HG01402, NA18621, HG02385, NA18947, NA20508, NA19066, NA18647, NA18508, NA12273, NA20783, NA18565, HG02375, HG02026, HG01815, NA20878, NA18979, HG00457, HG02078, HG03115, HG00729, HG02691, HG03616, HG02017, HG02050, NA20332, NA18530, NA18959, HG00737, HG01518, HG00449, HG02589, HG00261, NA12399, NA19067, NA18988, HG03009, HG00271, HG03782, HG00663, HG01873, HG00641, NA18940, HG02690, HG00599, HG02383, HG01168, NA20911, NA18993, NA18547, NA18960, NA19062, NA18571, HG01063, HG01365, HG00185, HG02603, NA18949, NA12275, HG03910, NA20775, NA20812, HG02736, HG00325, NA19238, HG00705, NA18966, HG04047, NA18557, HG01048, HG02477, NA20515, NA18539, HG01851, NA20753, HG02134, HG02479, NA20904, NA18951, NA18605, NA18747, HG00731, HG00443, NA18538, HG03714, HG02070, HG03088, HG02142, HG01095, HG00657, NA20810, NA20862, HG01845, NA19081, HG03900, HG01498, HG00275, NA18579, HG02508, NA18948, HG01796, HG01029, HG00239, NA19064, NA18537, HG03967, HG01047, HG00284, HG03829, NA11919, HG00651, NA19084, HG02787, HG04173, NA18912, NA18532, NA06989, NA18553, NA19452, HG02286, NA18531, NA12778, HG01697, HG00126, NA19625, HG01625, HG03694, HG00376, NA19012, NA19017, HG00407, NA19003, HG02330, NA20872, NA18632, NA21117, NA18533, HG00625, NA18564, HG02308, NA18628, HG03695, HG01874, NA20520, NA19010, HG01866, HG00473, NA20792, HG00116, HG02019, NA18615, HG02188, HG02371, HG02133, HG00614, HG02700, HG01765, HG02373, NA18631, HG03157, HG00381, HG02147, HG01804, NA19716, NA18636, NA18609, HG00310, NA20786, HG02013, NA18876, HG02182, NA19080, NA19780, HG01468, HG00728, HG01479, HG00595, HG01807, NA18957, NA18989, HG00628, NA18968, NA18623, HG02351, NA19065, HG03985, NA18612, NA19074, NA18577, NA11832, HG03989, HG02760, HG03741, HG00626, HG00881, NA20874, HG03800, HG03857, HG02652, NA19055, NA12814, HG00351, HG01079, NA20274, HG02035, NA18561, HG04202, HG02318, HG01280, HG02061, HG00367, NA19795, NA19092, NA18486, HG03280, HG01465, HG01531, HG02058, HG00452, NA20805, NA19057, NA18596, HG03297, HG03792, HG00341, HG03139, NA19314, NA12413, HG00327, NA18967, HG01571, NA19076, HG02312, NA19005, NA19201, HG02151, HG02810, HG01779, NA19762, HG01853, NA19448, NA18595, HG03490, HG02087, HG02541, HG02155, NA19723, NA18982, NA18635, NA19198, NA18619, NA19916, HG00458, HG00330, NA20769, HG01816, HG00610, HG00851, HG00346, NA12283, HG04131, NA18964, HG01110, HG03594, HG00590, HG02395, HG03968, HG00106, NA18977, HG01495, NA18560, HG01527, HG01767, NA19075, HG03696, NA21107, NA19087, NA20869, NA19002, NA12828, HG03058, NA20533, HG03832, NA18973, HG00530, HG00419, NA19451, NA21122, NA18648, HG01312, HG00108, HG01603, NA20818, NA19007, NA18614, HG00543, HG00313, HG02402, HG01784, HG01139, HG01136, NA18544, HG02977, HG00629, HG02136, NA19082, NA20524, HG02152, NA19077, HG03760, HG01790, NA20809, HG00653, NA18644, HG02397, HG00701, HG04107, HG03291, NA20536, NA18939, HG02390, NA18637, HG04019, NA20126, NA20767, HG04180, HG01808, NA18630, HG02757, HG01948, NA18757, HG02364, NA19114, HG01414, NA19000, HG00844, HG00110, HG04155, NA18946, NA19001, HG03740, HG00613, HG03745, HG03391, NA06985, HG03755, NA20534, HG01530, NA20765, NA18546, NA21087, HG00476, HG03240, NA18961, NA18543, HG02049, HG04239, HG03838, HG01800, HG01253, HG00136, NA19037, NA18941, HG00638, HG00623, NA07051, NA19334, HG01598, HG03488, HG01205, HG00607, NA18629, HG01933, NA19786, NA18643, NA18591, NA21094, NA19085, HG01862, HG00125, NA19475, HG01801, NA19818, NA19759, HG00672, HG00371, HG01491, HG00409, HG03896, HG02230, HG01556, NA19060, HG00421, HG00329, NA18987, NA12749, HG02032, HG00656, HG03894, NA20528, NA18552, HG01883, HG00372, HG00252, NA18984, NA07056, HG02425, HG01863, HG03890, HG00759, NA18522, NA18549, HG03129, HG02006, HG00180, NA18622, HG00437, HG02060, NA18965, HG01976, HG01926
Known GenesLINC00971
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3596822
Frequency
Sample Size2504
Observed Gain0
Observed Loss424
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer