Variant Details

Variant: esv3596375

Internal ID

6636646

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr3:62624859..62626508	hg38	UCSC Ensembl
Inner	chr3:62624876..62626491	hg38	UCSC Ensembl
Outer	chr3:62624842..62626525	hg38	UCSC Ensembl
	chr3:62610534..62612183	hg19	UCSC Ensembl
Inner	chr3:62610551..62612166	hg19	UCSC Ensembl
Outer	chr3:62610517..62612200	hg19	UCSC Ensembl

Cytoband

3p14.2

Allele length

Assembly	Allele length
hg38	1650
hg19	1650

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11026403, essv11026458, essv11026417, essv11026481, essv11026432, essv11026430, essv11026454, essv11026496, essv11026506, essv11026497, essv11026399, essv11026494, essv11026466, essv11026479, essv11026405, essv11026420, essv11026467, essv11026460, essv11026440, essv11026513, essv11026498, essv11026404, essv11026472, essv11026424, essv11026438, essv11026437, essv11026471, essv11026474, essv11026448, essv11026478, essv11026429, essv11026453, essv11026489, essv11026385, essv11026446, essv11026449, essv11026395, essv11026406, essv11026475, essv11026450, essv11026383, essv11026463, essv11026408, essv11026423, essv11026456, essv11026393, essv11026411, essv11026433, essv11026394, essv11026515, essv11026442, essv11026477, essv11026412, essv11026416, essv11026511, essv11026428, essv11026439, essv11026464, essv11026387, essv11026421, essv11026483, essv11026386, essv11026388, essv11026434, essv11026476, essv11026419, essv11026445, essv11026413, essv11026427, essv11026482, essv11026468, essv11026508, essv11026392, essv11026435, essv11026505, essv11026382, essv11026452, essv11026485, essv11026443, essv11026400, essv11026501, essv11026415, essv11026484, essv11026425, essv11026414, essv11026493, essv11026500, essv11026451, essv11026488, essv11026503, essv11026512, essv11026499, essv11026447, essv11026390, essv11026469, essv11026487, essv11026418, essv11026461, essv11026410, essv11026422, essv11026462, essv11026480, essv11026396, essv11026402, essv11026441, essv11026495, essv11026486, essv11026455, essv11026391, essv11026409, essv11026389, essv11026401, essv11026444, essv11026473, essv11026398, essv11026465, essv11026397, essv11026426, essv11026514, essv11026491, essv11026431, essv11026407, essv11026509, essv11026502, essv11026490, essv11026457, essv11026507, essv11026470, essv11026510, essv11026436, essv11026459, essv11026504, essv11026492, essv11026384

Samples

HG03136, HG02666, HG03370, NA20281, HG02317, NA19248, HG02427, NA19214, HG01241, HG02970, HG03280, NA18523, NA19437, HG02546, HG01882, HG02983, HG03410, HG02549, HG03129, HG02759, HG02255, HG03247, NA20294, HG03313, HG01051, NA18877, HG02014, HG01956, HG02722, HG02887, NA19338, HG03048, HG03298, HG03099, NA18507, HG03294, NA19320, NA18488, HG03378, HG02583, HG03039, HG01551, NA19147, NA19143, NA20340, HG01468, HG02308, HG02870, HG02585, HG03558, HG02588, NA19914, HG03088, NA19383, HG03470, NA18508, NA19239, HG02462, NA19107, HG03578, HG02772, HG02861, HG03241, NA19351, HG02851, HG03024, HG03539, HG03565, HG03027, NA19457, HG03114, HG02756, NA19213, HG02888, HG03225, HG02814, HG02840, HG03126, HG02442, HG02878, HG02562, HG03473, NA18522, HG02343, HG03069, HG02502, HG02571, NA19159, HG03118, HG02624, HG03132, HG03028, NA19376, HG03303, HG02819, NA18909, NA20332, HG03045, HG01269, HG02628, HG02561, HG03081, HG02465, NA19041, NA19225, HG02702, HG03074, HG03259, NA19399, HG02679, NA18499, HG02476, HG03077, NA19916, HG02485, HG02642, NA19171, HG01985, HG03271, HG03388, NA19204, HG01462, HG02315, NA19473, HG03517, NA19185, HG02505, NA19454, HG02332, HG02860, NA19200, HG02820, HG03091, NA19439

Known Genes

CADPS

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3596375

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	134
Observed Complex	0
Frequency	n/a