Variant Details

Variant: esv3596137

Internal ID

6983454

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr3:50086225..50087292	hg38	UCSC Ensembl
Inner	chr3:50086260..50087258	hg38	UCSC Ensembl
Outer	chr3:50086191..50087327	hg38	UCSC Ensembl
	chr3:50123658..50124725	hg19	UCSC Ensembl
Inner	chr3:50123693..50124691	hg19	UCSC Ensembl
Outer	chr3:50123624..50124760	hg19	UCSC Ensembl

Cytoband

3p21.31

Allele length

Assembly	Allele length
hg38	1068
hg19	1068

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv11010699, essv11010681, essv11010698, essv11010708, essv11010736, essv11010728, essv11010741, essv11010687, essv11010680, essv11010735, essv11010729, essv11010675, essv11010671, essv11010710, essv11010719, essv11010674, essv11010693, essv11010716, essv11010694, essv11010701, essv11010725, essv11010702, essv11010732, essv11010733, essv11010712, essv11010709, essv11010738, essv11010718, essv11010697, essv11010734, essv11010683, essv11010705, essv11010731, essv11010713, essv11010706, essv11010665, essv11010667, essv11010685, essv11010695, essv11010690, essv11010740, essv11010677, essv11010696, essv11010664, essv11010668, essv11010707, essv11010689, essv11010723, essv11010714, essv11010720, essv11010703, essv11010711, essv11010673, essv11010721, essv11010739, essv11010700, essv11010686, essv11010724, essv11010704, essv11010717, essv11010684, essv11010682, essv11010678, essv11010672, essv11010669, essv11010676, essv11010730, essv11010679, essv11010737, essv11010688, essv11010666, essv11010727, essv11010726, essv11010691, essv11010722, essv11010670, essv11010692, essv11010715

Samples

HG00096, HG00121, NA12814, NA10851, HG00187, NA20274, NA11933, HG00257, HG01389, HG00181, HG04164, HG00115, NA19669, HG01461, HG00271, HG02792, HG00138, NA20774, HG03765, NA20769, NA11992, HG00346, NA21108, NA20541, HG00139, HG02490, HG00106, NA20775, HG00113, HG00309, HG00160, NA20764, HG01275, HG00323, HG01550, HG00365, HG00313, HG00137, HG00290, HG00332, HG01247, HG02090, HG01789, HG00190, HG01684, HG01612, HG00132, HG01675, NA19776, HG00284, HG01512, HG01762, HG00157, NA18553, NA20282, HG01474, HG01936, NA20821, HG00382, NA20522, NA12716, HG01131, HG00366, HG01685, NA07051, HG00308, NA19679, NA12763, HG00107, HG00111, HG02238, HG00378, NA12749, HG00288, HG00267, NA19726, NA11843, NA12776

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3596137

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	78
Observed Complex	0
Frequency	n/a