A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3595902



Internal ID6983220
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:37936854..37945441hg38UCSC Ensembl
Innerchr3:37936854..37945441hg38UCSC Ensembl
Outerchr3:37936512..37945816hg38UCSC Ensembl
chr3:37978345..37986932hg19UCSC Ensembl
Innerchr3:37978345..37986932hg19UCSC Ensembl
Outerchr3:37978003..37987307hg19UCSC Ensembl
Cytoband3p22.2
Allele length
AssemblyAllele length
hg388588
hg198588
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv10983573, essv10983594, essv10983592, essv10983566, essv10983607, essv10983484, essv10983510, essv10983699, essv10983591, essv10983575, essv10983519, essv10983507, essv10983481, essv10983445, essv10983461, essv10983673, essv10983475, essv10983490, essv10983624, essv10983590, essv10983638, essv10983541, essv10983496, essv10983542, essv10983586, essv10983506, essv10983666, essv10983694, essv10983473, essv10983597, essv10983686, essv10983513, essv10983581, essv10983640, essv10983456, essv10983639, essv10983593, essv10983672, essv10983632, essv10983630, essv10983589, essv10983636, essv10983649, essv10983499, essv10983691, essv10983643, essv10983491, essv10983606, essv10983583, essv10983469, essv10983609, essv10983615, essv10983479, essv10983546, essv10983663, essv10983459, essv10983629, essv10983470, essv10983608, essv10983512, essv10983580, essv10983561, essv10983532, essv10983483, essv10983454, essv10983554, essv10983458, essv10983633, essv10983620, essv10983582, essv10983466, essv10983550, essv10983658, essv10983451, essv10983480, essv10983674, essv10983517, essv10983555, essv10983635, essv10983509, essv10983657, essv10983557, essv10983522, essv10983605, essv10983523, essv10983622, essv10983601, essv10983572, essv10983551, essv10983664, essv10983660, essv10983564, essv10983487, essv10983612, essv10983478, essv10983584, essv10983662, essv10983453, essv10983631, essv10983526, essv10983690, essv10983667, essv10983516, essv10983547, essv10983563, essv10983488, essv10983683, essv10983637, essv10983497, essv10983650, essv10983614, essv10983634, essv10983588, essv10983654, essv10983695, essv10983671, essv10983489, essv10983652, essv10983494, essv10983696, essv10983680, essv10983613, essv10983535, essv10983616, essv10983611, essv10983688, essv10983621, essv10983665, essv10983603, essv10983559, essv10983596, essv10983515, essv10983647, essv10983602, essv10983651, essv10983521, essv10983527, essv10983628, essv10983576, essv10983571, essv10983552, essv10983543, essv10983467, essv10983574, essv10983482, essv10983474, essv10983471, essv10983623, essv10983493, essv10983692, essv10983625, essv10983530, essv10983599, essv10983539, essv10983556, essv10983540, essv10983449, essv10983697, essv10983464, essv10983562, essv10983486, essv10983518, essv10983585, essv10983676, essv10983560, essv10983524, essv10983600, essv10983565, essv10983648, essv10983577, essv10983579, essv10983514, essv10983476, essv10983465, essv10983448, essv10983618, essv10983604, essv10983462, essv10983460, essv10983501, essv10983595, essv10983549, essv10983619, essv10983531, essv10983693, essv10983502, essv10983598, essv10983670, essv10983646, essv10983610, essv10983669, essv10983661, essv10983536, essv10983656, essv10983569, essv10983587, essv10983472, essv10983447, essv10983457, essv10983641, essv10983682, essv10983679, essv10983684, essv10983626, essv10983528, essv10983701, essv10983668, essv10983455, essv10983642, essv10983653, essv10983500, essv10983548, essv10983659, essv10983545, essv10983537, essv10983520, essv10983504, essv10983525, essv10983534, essv10983685, essv10983468, essv10983677, essv10983529, essv10983644, essv10983567, essv10983452, essv10983627, essv10983689, essv10983568, essv10983700, essv10983681, essv10983503, essv10983477, essv10983492, essv10983678, essv10983578, essv10983485, essv10983450, essv10983498, essv10983495, essv10983508, essv10983698, essv10983687, essv10983446, essv10983645, essv10983463, essv10983505, essv10983538, essv10983558, essv10983544, essv10983570, essv10983553, essv10983511, essv10983675, essv10983533, essv10983655, essv10983617
SamplesNA20882, HG03593, HG00143, NA12286, NA19204, NA20783, HG03687, HG03753, HG02784, HG02661, HG00257, HG00457, HG00315, NA20802, HG02600, HG02017, NA12340, HG02382, NA20332, HG00115, HG00654, HG00097, NA18969, HG01873, HG01325, HG00589, NA18597, HG03943, HG00674, HG02146, HG01168, NA20795, HG00238, HG03673, HG03913, NA19062, NA07347, NA20768, HG03917, NA20518, NA21109, NA20775, NA11932, HG01973, HG01525, HG04020, HG03814, NA19789, NA18539, HG00137, NA20535, NA12760, HG00380, NA18525, HG02075, HG03786, HG02678, NA20521, NA19984, HG03928, HG03491, HG03771, HG01941, NA20875, NA18572, HG04177, NA12234, NA18548, HG00740, HG03730, NA20866, HG01536, NA11893, HG02787, NA20856, HG03969, HG03752, HG01988, HG00240, HG01107, HG03934, NA20872, NA20799, HG02089, HG00265, NA19712, HG03708, HG02088, HG01678, HG00353, NA20815, HG02790, HG03695, HG01685, HG01174, NA20530, HG00473, NA20792, NA21095, HG01861, HG02700, NA20847, HG03977, NA19779, NA21102, HG00342, NA20852, NA21093, NA18609, HG01125, HG00628, NA18624, NA12006, HG02805, NA18623, HG02351, HG04153, HG03955, NA20754, HG00255, HG01516, HG00593, HG00403, HG01746, HG01413, HG03800, HG02652, HG01098, HG03652, HG01303, NA20877, NA12814, HG01359, HG02262, NA20531, NA20813, NA20532, NA18603, HG02891, HG00640, HG00699, HG03668, HG04164, NA18606, NA19669, HG04001, HG03082, HG01571, NA19792, NA18550, HG03757, NA20850, NA20890, HG00689, NA19723, NA20905, HG01945, NA19197, HG02655, HG01510, HG01110, NA12761, HG03868, HG03851, HG00120, HG02490, HG02003, HG00106, NA20819, HG01757, HG04106, NA12815, HG00182, HG01259, NA20811, NA20884, NA19189, NA20764, HG03750, HG01605, HG03048, HG00675, HG01524, HG02402, HG01136, HG01360, HG00183, HG01187, HG00145, HG03787, HG01595, HG00328, NA12342, HG01864, NA20536, HG03636, HG02108, HG00584, HG04035, NA20126, NA20767, NA20770, NA18757, HG02789, HG03871, HG01414, NA19655, NA20859, HG03858, HG01383, NA18946, HG01705, HG01708, HG01403, HG00141, NA18646, HG01530, NA20765, NA18546, NA21143, NA21113, HG03866, HG04219, HG03790, HG03809, HG00285, HG04239, HG02064, NA19732, HG01362, NA20804, HG02651, NA07051, HG03850, NA20504, NA18643, HG02685, NA20516, HG04003, HG01991, HG01395, HG00409, NA21088, HG00421, NA12749, HG01783, HG03998, NA20528, HG04056, HG02425, HG03890, HG01672, NA21104, HG00554, HG00180, NA18562, HG01608
Known GenesCTDSPL
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3595902
Frequency
Sample Size2504
Observed Gain0
Observed Loss257
Observed Complex0
Frequencyn/a


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