Variant Details

Variant: esv3595251

Internal ID

6982569

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr3:9853647..9855101	hg38	UCSC Ensembl
Inner	chr3:9853720..9855028	hg38	UCSC Ensembl
Outer	chr3:9853574..9855174	hg38	UCSC Ensembl
	chr3:9895331..9896785	hg19	UCSC Ensembl
Inner	chr3:9895404..9896712	hg19	UCSC Ensembl
Outer	chr3:9895258..9896858	hg19	UCSC Ensembl

Cytoband

3p25.3

Allele length

Assembly	Allele length
hg38	1455
hg19	1455

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10918201, essv10918257, essv10918179, essv10918246, essv10918216, essv10918142, essv10918197, essv10918163, essv10918119, essv10918205, essv10918152, essv10918218, essv10918155, essv10918229, essv10918223, essv10918172, essv10918164, essv10918193, essv10918203, essv10918215, essv10918264, essv10918231, essv10918224, essv10918237, essv10918243, essv10918236, essv10918118, essv10918235, essv10918183, essv10918194, essv10918182, essv10918228, essv10918196, essv10918149, essv10918206, essv10918176, essv10918137, essv10918244, essv10918198, essv10918220, essv10918245, essv10918151, essv10918148, essv10918127, essv10918210, essv10918233, essv10918158, essv10918252, essv10918262, essv10918219, essv10918156, essv10918130, essv10918173, essv10918160, essv10918175, essv10918161, essv10918153, essv10918157, essv10918192, essv10918240, essv10918254, essv10918177, essv10918189, essv10918125, essv10918168, essv10918126, essv10918131, essv10918174, essv10918212, essv10918238, essv10918154, essv10918180, essv10918147, essv10918171, essv10918195, essv10918184, essv10918253, essv10918166, essv10918263, essv10918260, essv10918239, essv10918226, essv10918185, essv10918134, essv10918169, essv10918123, essv10918221, essv10918132, essv10918217, essv10918124, essv10918139, essv10918265, essv10918187, essv10918144, essv10918232, essv10918255, essv10918122, essv10918170, essv10918199, essv10918214, essv10918146, essv10918150, essv10918227, essv10918208, essv10918225, essv10918145, essv10918230, essv10918211, essv10918249, essv10918200, essv10918165, essv10918190, essv10918209, essv10918248, essv10918162, essv10918133, essv10918259, essv10918178, essv10918117, essv10918241, essv10918188, essv10918129, essv10918207, essv10918143, essv10918261, essv10918256, essv10918191, essv10918242, essv10918186, essv10918120, essv10918128, essv10918141, essv10918250, essv10918258, essv10918140, essv10918251, essv10918247, essv10918234, essv10918159, essv10918202, essv10918222, essv10918204, essv10918121, essv10918213, essv10918181, essv10918135, essv10918167, essv10918138, essv10918136

Samples

HG02890, HG02944, NA19700, HG02583, NA18861, HG01885, HG03175, HG03111, NA18507, NA18881, HG02798, HG03115, HG02891, HG03130, NA19092, HG02323, NA19819, HG03100, HG03295, NA19684, HG03518, HG02589, NA19190, NA18870, HG03372, NA20359, NA18510, HG03478, HG03199, NA19374, HG03082, HG03464, NA18519, HG02621, NA19201, HG03135, NA20320, NA19723, HG03370, HG03246, HG03578, NA19138, NA20287, HG01242, HG02489, HG03209, HG02562, NA19041, NA19137, HG03045, NA19235, NA19207, NA19385, HG03352, NA19026, HG03380, HG03225, HG03267, NA19456, HG03055, HG03394, HG03114, NA19200, HG03048, HG03169, HG02819, HG02716, HG02009, HG03343, HG03363, NA18934, NA19462, NA18933, HG03547, NA19184, HG01879, NA19455, NA19236, HG03457, NA19982, NA18915, HG01077, NA18871, HG03159, HG02470, HG02878, HG02537, HG01889, HG02757, HG03294, HG03301, HG03136, HG03202, NA18499, HG01241, NA19113, HG03446, HG03024, HG03391, HG02666, HG02585, NA18523, HG02586, NA18858, HG03109, NA19436, HG02813, NA19375, HG02330, HG02667, NA18909, NA19108, HG02308, HG01551, NA20362, HG03127, HG02941, NA19324, NA19310, NA19467, HG01137, HG01108, HG03108, HG02558, NA20357, NA19818, NA18501, NA19248, HG03112, HG02095, HG02970, NA19223, NA20334, HG03060, HG03351, NA19102, NA19770, NA19096, NA19900, HG02763, HG02855, NA18488, NA19312, HG03376, HG02805, HG01886, HG02808, HG02343, NA19346

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3595251

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	149
Observed Complex	0
Frequency	n/a