Variant Details

Variant: esv3594689

Internal ID

6982009

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:234351232..234352851	hg38	UCSC Ensembl
Inner	chr2:234351233..234352851	hg38	UCSC Ensembl
Outer	chr2:234351232..234352852	hg38	UCSC Ensembl
	chr2:235259876..235261495	hg19	UCSC Ensembl
Inner	chr2:235259877..235261495	hg19	UCSC Ensembl
Outer	chr2:235259876..235261496	hg19	UCSC Ensembl

Cytoband

2q37.1

Allele length

Assembly	Allele length
hg38	1620
hg19	1620

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10879822, essv10879895, essv10879872, essv10879903, essv10879843, essv10879830, essv10879875, essv10879849, essv10879870, essv10879850, essv10879845, essv10879821, essv10879887, essv10879878, essv10879883, essv10879851, essv10879869, essv10879900, essv10879831, essv10879884, essv10879891, essv10879892, essv10879896, essv10879882, essv10879874, essv10879899, essv10879819, essv10879853, essv10879824, essv10879848, essv10879818, essv10879825, essv10879846, essv10879835, essv10879836, essv10879816, essv10879867, essv10879852, essv10879841, essv10879827, essv10879844, essv10879889, essv10879820, essv10879823, essv10879866, essv10879888, essv10879902, essv10879873, essv10879832, essv10879839, essv10879864, essv10879904, essv10879861, essv10879856, essv10879879, essv10879838, essv10879854, essv10879890, essv10879859, essv10879828, essv10879855, essv10879817, essv10879898, essv10879871, essv10879880, essv10879857, essv10879881, essv10879876, essv10879847, essv10879868, essv10879885, essv10879865, essv10879840, essv10879826, essv10879862, essv10879858, essv10879863, essv10879842, essv10879901, essv10879829, essv10879834, essv10879877, essv10879894, essv10879833, essv10879893, essv10879886, essv10879837, essv10879860, essv10879897

Samples

NA19141, NA19700, HG02628, HG01462, NA19399, NA19332, NA19020, NA19350, HG02804, HG02476, HG03515, NA20346, HG02536, NA19190, NA18870, NA19315, HG02952, NA20317, NA19131, HG03342, HG02645, HG03246, HG03578, HG03040, NA19923, NA19041, NA20278, NA19207, NA19385, NA19317, NA19026, NA20412, HG02946, NA18864, NA19456, HG03394, NA19451, HG03270, HG03169, HG03120, HG02439, NA19908, NA19707, HG03547, HG03291, NA19236, HG02470, HG02878, HG02555, HG03382, HG02881, NA19338, HG03391, HG01956, HG02484, HG01896, HG03064, HG02255, NA19206, NA19440, NA19309, NA19108, NA19256, NA18517, HG03437, NA19434, HG02010, HG02983, HG01894, HG02721, NA19380, HG02839, HG02814, NA19323, NA19143, HG03442, HG03025, HG02646, NA19468, HG02938, HG02107, HG02462, NA19770, HG02013, NA19711, HG02763, HG02861, HG02808, HG03196

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3594689

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	89
Observed Complex	0
Frequency	n/a