Variant Details

Variant: esv3594150

Internal ID

6634426

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:209540494..209541637	hg38	UCSC Ensembl
Inner	chr2:209540495..209541637	hg38	UCSC Ensembl
Outer	chr2:209540494..209541638	hg38	UCSC Ensembl
	chr2:210405218..210406361	hg19	UCSC Ensembl
Inner	chr2:210405219..210406361	hg19	UCSC Ensembl
Outer	chr2:210405218..210406362	hg19	UCSC Ensembl

Cytoband

2q34

Allele length

Assembly	Allele length
hg38	1144
hg19	1144

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10835278, essv10835291, essv10835332, essv10835387, essv10835384, essv10835290, essv10835318, essv10835254, essv10835282, essv10835335, essv10835309, essv10835368, essv10835323, essv10835279, essv10835260, essv10835325, essv10835261, essv10835343, essv10835313, essv10835240, essv10835242, essv10835275, essv10835364, essv10835289, essv10835374, essv10835376, essv10835308, essv10835246, essv10835303, essv10835270, essv10835337, essv10835355, essv10835312, essv10835284, essv10835317, essv10835273, essv10835379, essv10835296, essv10835310, essv10835271, essv10835293, essv10835315, essv10835339, essv10835352, essv10835353, essv10835244, essv10835369, essv10835314, essv10835300, essv10835331, essv10835283, essv10835286, essv10835265, essv10835327, essv10835287, essv10835378, essv10835285, essv10835297, essv10835334, essv10835256, essv10835328, essv10835351, essv10835367, essv10835264, essv10835382, essv10835238, essv10835247, essv10835249, essv10835347, essv10835354, essv10835370, essv10835269, essv10835288, essv10835348, essv10835276, essv10835307, essv10835241, essv10835366, essv10835295, essv10835341, essv10835253, essv10835365, essv10835239, essv10835316, essv10835326, essv10835262, essv10835377, essv10835311, essv10835320, essv10835358, essv10835306, essv10835258, essv10835298, essv10835349, essv10835304, essv10835255, essv10835359, essv10835294, essv10835350, essv10835333, essv10835360, essv10835375, essv10835274, essv10835301, essv10835322, essv10835245, essv10835263, essv10835372, essv10835363, essv10835292, essv10835259, essv10835344, essv10835381, essv10835361, essv10835268, essv10835345, essv10835280, essv10835340, essv10835356, essv10835373, essv10835362, essv10835338, essv10835248, essv10835252, essv10835251, essv10835257, essv10835357, essv10835329, essv10835336, essv10835243, essv10835281, essv10835319, essv10835321, essv10835267, essv10835266, essv10835380, essv10835383, essv10835371, essv10835277, essv10835342, essv10835250, essv10835305, essv10835302, essv10835346, essv10835386, essv10835385, essv10835272, essv10835330, essv10835299, essv10835324

Samples

HG02715, HG02879, HG03163, NA19146, HG02496, NA18870, NA19248, HG02107, NA19312, HG03160, HG02810, HG03567, HG02621, HG03351, HG03521, HG00743, NA19437, NA19114, HG02546, HG03563, HG03410, HG03055, NA19149, NA20346, HG02255, HG03086, NA19223, HG02979, HG01403, HG03133, HG02952, NA19451, HG03571, HG01915, HG03311, HG02884, NA19449, HG03048, NA18489, NA19461, HG02676, HG03401, HG03548, HG03538, HG01134, HG03380, HG02976, HG03394, NA19147, HG03159, HG03049, NA18868, HG02455, HG03461, NA18912, NA19383, HG03470, NA19984, HG03451, HG03054, HG03300, NA19309, NA19917, HG00638, NA19107, HG02577, HG03578, HG01272, HG02557, HG02643, HG03241, NA18876, NA19351, HG03445, HG03464, HG01879, HG03565, NA18916, HG02595, HG03225, HG02814, HG03169, HG01111, HG03085, NA19153, HG02325, HG03190, HG03195, HG02054, NA20291, NA18498, HG02922, NA18522, HG02594, HG02804, NA18502, HG02501, HG03097, NA18504, HG03366, HG03518, HG02511, HG03069, HG03073, HG02571, HG02614, NA20355, HG01880, HG02582, HG01933, HG02570, HG03385, HG03028, NA19235, HG02947, NA19138, HG03303, HG02819, HG02645, NA18915, NA20276, HG03045, NA19116, NA20274, NA19818, HG03476, HG03081, HG02589, HG02702, HG02891, HG03259, HG02678, HG03258, HG03369, HG03077, NA19198, NA19118, HG02721, HG03060, HG03117, NA19113, HG02315, NA18908, NA19092, HG01890, HG02855, HG03460, NA19121, NA19922, HG03091

Known Genes

MAP2

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3594150

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	150
Observed Complex	0
Frequency	n/a